Acidianus sp. HS-5: HS5_20630
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Entry
HS5_20630 CDS
T07980
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
acih
Acidianus sp. HS-5
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acih03016
]
HS5_20630
Enzymes [BR:
acih01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HS5_20630
Transfer RNA biogenesis [BR:
acih03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HS5_20630
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BDC19173
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All DBs
Position
1910518..1911072
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AA seq
184 aa
AA seq
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MMSIKGYIFGDKIVIFDINNSKKIYSSGFYGKPLGINKPKKAEDIKTPLELSIIEGLYLL
KKGEMVVMHGDNKLDEKDLYKIGKENIARFESLFAVYSDLRNKGFVVRSGIKFGADFAVY
TLGPGLEHAPYVVIVLDANSILLANELMSFGRVSHSTRKKLILAIVNMPPPKNIRYVMFK
WVKL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtataaagggatacatattcggcgataagatagtaatatttgatataaataat
agtaagaaaatatactcttcaggtttttacggaaaacctttaggaataaataaaccaaag
aaggcagaggatataaaaacaccattagagctttctataatagaaggattatatttacta
aagaaaggagaaatggtagtaatgcacggagataataaactagatgaaaaagacttgtat
aaaataggaaaagagaacatagctagatttgaaagtttatttgcagtgtattctgactta
aggaataaaggatttgtagttagatctggaataaaatttggtgccgatttcgctgtatat
actctaggaccaggattagaacatgcaccctatgtagttatagttttagacgcaaactca
atacttcttgcaaatgaactaatgagttttggaagggtatctcatagtactagaaagaaa
ctcattttagcaattgttaatatgcctccaccaaaaaatataagatacgtaatgtttaaa
tgggtgaaattatag
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