Acidianus sp. HS-5: HS5_20850
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Entry
HS5_20850 CDS
T07980
Name
(GenBank) DNA-binding protein
KO
K15171
transcription elongation factor SPT4
Organism
acih
Acidianus sp. HS-5
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HS5_20850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_20850
03019 Messenger RNA biogenesis [BR:
acih03019
]
HS5_20850
Transcription machinery [BR:
acih03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HS5_20850
RNA polymerase I system
HS5_20850
Messenger RNA biogenesis [BR:
acih03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HS5_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
zf-ChsH2
Zn_ribbon_3
DZR
zf-P11
Zn_ribbon_15
Zn_ribbon_RRN7
Zn_Ribbon_TF
zf-C3HC4_3
HypA
TackOD1
HPIP_like
Motif
Other DBs
NCBI-ProteinID:
BDC19195
LinkDB
All DBs
Position
complement(1929366..1929566)
Genome browser
AA seq
66 aa
AA seq
DB search
MPKSSIFKACRNCKALVLPDQDACPVCGGTSFTEEWEGMIIILNENSELMNLTGAKKPWR
YAINIK
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatcctcaatttttaaagcatgtaggaattgcaaggcactagttttgccagac
caagatgcgtgtccggtatgcgggggcaccagtttcactgaagaatgggaaggtatgatt
ataattcttaacgaaaattcagagctgatgaatttaacaggggcaaagaaaccttggagg
tacgcgataaatatcaagtag
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