KEGG   Acidianus sp. HS-5: HS5_20950
Entry
HS5_20950         CDS       T07980                                 
Name
(GenBank) DNA polymerase III sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
acih  Acidianus sp. HS-5
Pathway
acih03030  DNA replication
acih03410  Base excision repair
acih03420  Nucleotide excision repair
acih03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HS5_20950
   03410 Base excision repair
    HS5_20950
   03420 Nucleotide excision repair
    HS5_20950
   03430 Mismatch repair
    HS5_20950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acih03032]
    HS5_20950
   03400 DNA repair and recombination proteins [BR:acih03400]
    HS5_20950
DNA replication proteins [BR:acih03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HS5_20950
DNA repair and recombination proteins [BR:acih03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HS5_20950
   MMR (mismatch excision repair)
    Other MMR factors
     HS5_20950
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    HS5_20950
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 DNA_pol3_beta_3 DUF6646 Hus1
Other DBs
NCBI-ProteinID: BDC19205
LinkDB
Position
complement(1935711..1936463)
AA seq 250 aa
MLNSLMKLSYDDVRDFKNILTALAKLVDEASLKINPDGVELVAIDRAHISLVRLQIPKEA
FKDYDVQEEFNFGFNTQYLLKILSAPKKKESMELEAEDPSQVIIRISGGINRDYIIRNLD
VSPPEVPELNLEFDVKASINSSGFNKAVGQISSVSDTILFKADENGITLRSKSETDVEVE
FAKESGGLQDIEISKPAESTYSCDYLDDILALTKLSGLMKISFSDQKPLQIQFNMESGGN
VIYLLAPQMG
NT seq 753 nt   +upstreamnt  +downstreamnt
atgttaaattcactcatgaagctttcttatgatgatgtaagagattttaagaatatatta
actgcattagcaaagctagtcgatgaagcatcactaaagataaacccagatggagtggaa
ttagtagctatagacagagctcatatttcattggtaagacttcaaattcctaaggaagca
ttcaaggattacgacgttcaagaggaatttaatttcggttttaatacccaatatctatta
aagattttgtcagcacctaagaagaaggaatccatggagctagaggcagaggatccttca
caggttataataaggatttctggcggtattaatagggattatattataaggaatttagac
gtttctcctccagaagttcctgagcttaacttggagtttgatgttaaagctagcataaat
tcttctggatttaacaaagcagtgggtcaaatttcatctgtaagcgacactatactattt
aaggccgatgagaatggtattacacttagaagtaagtctgaaactgatgtagaagtagaa
tttgctaaagaatcaggtgggttacaagacatagagatttcgaagcctgcagagtctacg
tactcttgtgattatttggatgatatattggctttaacaaaactttctggtttaatgaaa
atctcgttctctgatcagaaaccattacagatacagtttaatatggaatctggcggtaat
gtaatatacttacttgctccacaaatggggtga

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