Acidianus sp. HS-5: HS5_21210
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Entry
HS5_21210 CDS
T07980
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
acih
Acidianus sp. HS-5
Pathway
acih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HS5_21210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_21210
Enzymes [BR:
acih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HS5_21210
Transcription machinery [BR:
acih03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HS5_21210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
BDC19231
LinkDB
All DBs
Position
complement(1956320..1958962)
Genome browser
AA seq
880 aa
AA seq
DB search
MSEKIIKGVKFGILSPDEIRKMSVTAIITSEVYDEDGTPIEGSVMDPRLGVIEPGQRCPT
CGNMMGNCPGHFGHIELVKPVMHVGFVKHVYDLLRATCRRCGRIKLEDQELERYGRIYHA
INKRWPSAAKRLVEHIKKSSMKNPVCPHCGEKQLKIKLEKPYNFYEERKEGVVRLTPVDI
RDRLERIPDDDVELLGYDPKTSRPEWMILTVLPVPPITIRPSIMIENGIRAEDDLTHKLV
DIVRINERLKESIDAGAPQLIVEDLWDLLQYHVATYFDNEIPGLPTSKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGVPVDIAKILTVPERVTKWNIER
MREYVLNGPDKWPGANYVIKPDGRRIDLRYVKDRKEFASTLTPGFIIERHLIDGDVVIFN
RQPSLHRISMMAHRVRVLPGRTFRLNLLVCPPYNADFDGDEMNLHVPQSEEAIAEAKELM
TVHKNILTPRYGGPIMGSAQDYISGAYLLTVKTTLLTEDEVQTILGVANISKDIGEPAIL
APKKLYTGKQVISLFLPEDFNYHGQANIASGPRLCADEDCPHDSYVVIKNGKLLEGVFDK
KALGNQQPESILHWLIREYSEDYGLWLMDNIFKIFIRYIEIHGLTMSIDDVTISQDAMSK
ISEKSKQADRQVQELIAKYEKGELEQIPGRTLEESLESYILDTLDKLRNDAGEIAASDLD
PFNNVYIMARTGARGSVLNITQMAAMLGQQSVRGERISRGYYERALPHFKRNDISAEARG
FIYSSFRSGLNPIEVFFHAAAGREGLVDTAVRTSQSGYMQRRLVNALSDLRIEYDGTVRT
LYGEIIQTLYGGDGVHPMYSSHGKTVDVNRILERIVGWKR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaataataaaaggagtaaaatttggaatattatctcctgacgaaataaga
aaaatgtcagtaacagcaataattacctcagaggtctatgacgaagacggcactccaata
gaaggtagtgtaatggatccaaggctaggcgtaatagaacctggtcaacgttgtcctaca
tgtggaaatatgatgggtaactgtccgggacattttggtcatatagaattagtaaaacct
gttatgcatgtaggttttgttaagcatgtgtatgatttacttcgcgcaacttgtaggaga
tgcggaagaataaagttagaggatcaagagcttgaaaggtacggaagaatctatcatgca
ataaataagagatggccttcagctgctaaaaggcttgtagaacacataaagaaatcttca
atgaaaaatccagtctgtcctcattgtggagaaaaacaattaaagataaaactcgaaaaa
ccttataacttctatgaggagagaaaagaaggtgtagttaggctaactccagttgatata
agagacaggcttgaaagaattcctgacgacgatgttgaattactaggttatgatccaaaa
accagtaggcctgaatggatgattttaactgtattgccagtacctcctatcacaataagg
ccttccataatgatagaaaatggaattagagctgaagatgatctaactcataaattagtg
gatatagttagaattaatgagagattaaaggaaagtattgatgccggtgctccacaatta
atagtagaagatttatgggatttattacaatatcatgtcgcaacctatttcgataatgaa
attccaggcttacctacctcaaagcatagatctggtagaccgttaagaacgcttgctcaa
agattaaagggcaaagaaggtagatttagaggtaacttatctggaaaaagagtcgacttt
tcatcaagaactgtaatatccccagatcctaatataagtattgacgaggtaggagttccc
gtagatattgcaaaaatactaactgttccagaaagagtgaccaagtggaatattgaaagg
atgagggaatatgtattaaatggaccggataaatggcctggagcaaattatgttataaag
ccagatggtagaagaatagacttacgttatgtgaaggatagaaaagagtttgcctctaca
ctgactccaggatttataattgaaaggcatttaatagatggagatgtagtaatattcaat
agacaaccatctttgcacagaatttctatgatggctcatagagttagagtactgcccggt
agaacgtttaggttgaatttacttgtatgtccaccgtataacgcagactttgatggcgat
gaaatgaacttacatgttcctcagtcagaagaggcaatagctgaagctaaagagctaatg
acagtgcacaagaatatcctgactcctagatatggagggccaattatgggttcagcccaa
gattatattagcggagcttacttgcttacagttaaaactacacttttaacagaagatgaa
gtacaaactatacttggcgtagctaatatttcaaaagatattggagaacctgcaatactt
gcgccaaagaaattatatactggaaagcaagtaattagcctatttctgcctgaggacttt
aactatcacggtcaagccaacattgccagcggtcctagattatgtgctgatgaagattgt
ccacacgattcgtatgtagttattaagaatggaaaattattggaaggagtatttgataag
aaagccttaggtaatcaacagccagaaagtatacttcattggttaatcagagaatattca
gaggattacggactatggttaatggacaatatattcaagatattcattaggtatatagag
atacatgggttaacgatgagtatagacgatgtaacaatttcacaggacgctatgagtaag
atatctgaaaaatctaagcaagctgataggcaagtccaggaacttattgctaaatatgaa
aaaggagaattagaacaaataccaggtagaactttagaggaaagcttggagagctacata
ttagatactttggacaaattgaggaatgatgcaggtgaaattgcagcgtcagatttagat
ccgtttaataatgtgtatataatggcaaggactggtgctagaggtagcgtactaaatata
acgcagatggccgcgatgctaggccagcagtcagtaagaggagaaagaatatctagagga
tactatgaaagggcattacctcattttaagcgtaatgatatatcggcagaagcaagaggg
ttcatatattcctcatttaggagtggactaaatcctatagaagtattcttccatgccgca
gcaggtagagaaggcctggttgataccgcagtaagaacttcacaaagcggttacatgcag
agaagattagtaaatgcgttatccgatttaagaattgagtatgacggtaccgtgagaact
ttatatggcgagataatacaaacattatatggcggtgatggagtgcatccaatgtatagt
tcccacggtaaaaccgtagatgtaaatagaattctggaaagaattgtaggttggaagagg
tga
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