Acidianus sp. HS-5: HS5_28050
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Entry
HS5_28050 CDS
T07980
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
acih
Acidianus sp. HS-5
Pathway
acih03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HS5_28050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_28050
Transcription machinery [BR:
acih03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HS5_28050
Prokaryotic type
Archaeal type
TFB
HS5_28050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Sigma70_r4
BLI1
Zn_Ribbon_Prim
Sigma70_r4_2
Zn_ribbon_LysW
HTH_11
Zn_ribbon_IS1595
A2L_zn_ribbon
GerE
FtrD-like
Zn_Ribbon_YjdM
Zn_ribbon_PADR1
RPA_interact_C
Zn_ribbon_SprT
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
BDC19915
LinkDB
All DBs
Position
complement(2536814..2537692)
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AA seq
292 aa
AA seq
DB search
MRCPVCSSEDIRYDTERGQYICANCGAVLEDEVIDQGPEWRAYNYQDRLERERIGSPLTL
KVHDQGLSTRIGYDKVKDRIKLMKMQKLQNRIRVSSKDKKLVTYLSMLNSEASKLDLPEH
VKETAAFILRRLVENGLAKRIDSYALVAAVLYYSCQVNNIPRYLQEIKTRYSLSSSELWK
ALERVHKVSKQLQSFKPKIKPVEYIPKIVEKLSLPQLVATKSAEVVNIMYKSGLTSGKGY
LALSAAAVYLVSTLMDVKKTQKEIADSLNITEVTIRNRYKEIIKNFDIEVSL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccagtttgttcttctgaagatataagatatgatacagaaagaggacaatac
atatgcgctaactgtggagcagtactggaagatgaggtaatagaccaaggacctgaatgg
agagcttacaattaccaagatagattagaaagagaaagaataggttctccgttaactttg
aaagttcatgatcaaggactctcgactagaataggctatgataaagtgaaagatagaata
aaattaatgaaaatgcaaaaattacaaaataggattagagtctcgtctaaagataagaaa
ctagttacatatctttcaatgcttaatagcgaagcatcgaagctagatttgccagaacac
gtaaaggagactgccgcattcatactgagaaggctagttgaaaatggtctggcaaaaaga
atagattcttatgcgttggttgctgcggtgctttattattcgtgccaagtaaataacata
cccagatacttgcaagagattaaaactaggtattctctctcttctagcgaattatggaaa
gccttagaaagagttcataaagtatcaaagcaattacagagctttaagcctaaaattaaa
ccagtagaatatattccaaagatcgtggaaaaacttagtttaccgcaacttgtagctact
aagtctgcggaggtagtaaatattatgtacaagagtggtttaactagtgggaaaggttat
ttagcattaagcgccgctgcagtatacttagtaagcactttaatggatgttaaaaagacg
cagaaggaaatagctgactctttaaatattacagaagtaacaataagaaacagatataaa
gaaattatcaaaaatttcgatattgaagtaagtttataa
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