Acidiferrobacter sp. SPIII_3: C4901_05095
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Entry
C4901_05095 CDS
T05469
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4901_05095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
acii02022
]
C4901_05095
02035 Bacterial motility proteins [BR:
acii02035
]
C4901_05095
Two-component system [BR:
acii02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C4901_05095
Bacterial motility proteins [BR:
acii02035
]
Pilus system
Twitching motility proteins
C4901_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_30
AAA
C2_N_APX
AAA_19
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AWP22796
LinkDB
All DBs
Position
complement(974659..976023)
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AA seq
454 aa
AA seq
DB search
MTIPQVLIIDDEADIRALLELTLGRMNIETRSAGDVVSAFALLEEYRFDLCLTDMRLPDG
DGLAIVRHIEEHHRGLPVAVITAHGSMETAIAALKGGAFDFVCKPLNINELRALVRSALN
LSKQAPSDGASAAAKLLGDSQAIREVRALIERLARGQAPVYISGESGTGKELAARLIHDL
GPRAGRPFVAVNCGAIPEQLMESEFFGHKKGSFTGAFNDKDGLFKTASGGTLFLDEVGDL
PVPMQVKLLRAIQEKAVRPVGSQLEVAVDVRILSATHKNLHDLVRTGAFRQDLYYRLNVI
ELVIPPLRERAEDIPALAAHLAAKLSMGRPLPLTPAALATLKRYPFPGNVRELENIMERA
LTLCESGEIDVADLRLPGHDAQGLPGKVAESEASPFDTGDYKGEQSLDEHLAQVERAAIE
KALRDTNQNKTAAARELGITFRALRYKLEKLGIE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcccccaagtcctcatcatcgatgacgaagccgatatccgcgcgctgctcgag
cttacgctcgggcgcatgaacatcgagacccgctcggccggcgacgtggtctcggccttc
gcgctgctcgaggagtaccggttcgacctgtgcctcacggacatgcgcctgcccgacggc
gacggtctggccatcgtccgccatatcgaggagcatcatcgcgggctaccggtggcggtc
atcaccgcccatgggagcatggagacggccatcgcggcattgaagggcggggccttcgac
ttcgtatgcaaaccgctcaatatcaatgaattacgggcgctcgtacgcagcgccctgaac
ctctcgaaacaggcgccgagcgacggcgcgagcgccgccgccaaacttctcggtgattcc
caggccatccgcgaggtccgcgccctcatcgagcgcctagcgcgcggccaggcgcccgta
tatatctccggggagtccggcaccggcaaggagctcgccgcgcgtctcatccatgatctc
gggccccgcgccggccgcccgttcgtggccgtcaactgcggggcgatacccgagcagctg
atggaaagcgagttcttcggccacaagaagggcagcttcaccggcgccttcaacgacaag
gacgggctattcaagaccgcaagcgggggcaccttgttcctagatgaggtcggcgacctg
ccggtccccatgcaggtgaagctcctgcgcgccatccaggagaaggcggtgcgtccggtc
ggcagccagctggaagtggcggtggacgtgcgcatcctgtcggccacgcacaaaaacctc
cacgacctggtgcgcaccggtgcgttccgccaggacctctactaccgcctgaacgtcatc
gagctcgtgatcccgccgctgcgcgaacgcgccgaggacatcccggcgcttgcggcgcat
cttgccgccaaactgagcatgggtcgccccttgccactcacccccgcggccttggcgaca
ctgaagagatatcccttccccggcaacgtccgcgaactcgagaacatcatggaacgggcg
ctgaccttgtgcgagagcggcgagatcgatgtggcggacctgcgtctgcccgggcacgat
gcccagggtctacctggcaaagtcgccgagtcggaggcctcgcccttcgataccggtgat
tacaaaggggaacagtcgctcgacgagcacctggcccaagtcgagcgcgcggcgatcgaa
aaggccctgcgcgacaccaaccagaacaagaccgccgccgcccgcgagctcggcatcacc
ttccgcgccctgcgctataagctcgaaaagctcggcatcgaataa
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