Acidiferrobacter sp. SPIII_3: C4901_05845
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Entry
C4901_05845 CDS
T05469
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03030
DNA replication
acii03430
Mismatch repair
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4901_05845
03430 Mismatch repair
C4901_05845
03440 Homologous recombination
C4901_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acii03032
]
C4901_05845
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_05845
Enzymes [BR:
acii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4901_05845
DNA replication proteins [BR:
acii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4901_05845
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4901_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWP24926
LinkDB
All DBs
Position
1138183..1138899
Genome browser
AA seq
238 aa
AA seq
DB search
MRQIVLDTETTGLEPSEGHRIIEVGAIEIVNRRLTGRRFHQYLNPDREIDAAAIEIHGIT
NAMLEDKPHFADVAAEFLGFIEGAELLIHNAPFDVGFLNAELARAIGGGCVLPVSAIEDC
CTVQDTLRLARTLHPGQKNNLDALCRRYSIDNSQRVVHGALLDAEILADVYLAMTGGQTA
LFDEESTAVEVVATEGFSYEGGAPLVIAPSTEELAAHEAYLEMLDKKSGGRCLWRLLG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atacgacagatcgtgctggatacggaaaccacgggccttgaaccctcggaggggcaccgc
atcatcgaggtgggggcgatcgagatcgtcaaccggcgcctcaccgggaggcgttttcac
caatacttgaatccggatcgcgagatcgacgcggcggcgatcgagatccatggcatcacc
aacgccatgctcgaggacaaaccgcacttcgcggatgtggccgcggagttcctcgggttc
atcgagggcgccgagcttttgatccataatgccccatttgacgtgggctttctgaatgcc
gagctcgcccgcgcgattggcggaggatgcgtattgccggtgagcgcgatcgaggactgc
tgcacggtgcaggacaccttgaggctcgcgcgcaccctgcatccgggccagaaaaacaac
ctggacgccttgtgccggcgttacagtatcgacaatagtcaacgggtcgtgcatggcgcg
ctgctcgatgccgagatcctggccgacgtctacctggccatgaccggtggccagacggcc
ttgttcgacgaagagagcaccgcagtcgaggtggtcgcgacggaaggcttttcctacgag
ggcggcgcgccgctcgtgatcgcgccgtcgaccgaggagctggccgcccacgaggcctat
ctggagatgctcgacaaaaagagcggcggccgctgtctctggcggctgctcggctag
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