Acidiferrobacter sp. SPIII_3: C4901_07660
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Entry
C4901_07660 CDS
T05469
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
acii
Acidiferrobacter sp. SPIII_3
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_07660
Enzymes [BR:
acii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4901_07660
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C4901_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
AAA_22
DUF7739
Motif
Other DBs
NCBI-ProteinID:
AWP23220
UniProt:
A0A2Z3QZ39
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All DBs
Position
1532429..1535734
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AA seq
1101 aa
AA seq
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MREAGVVMTSDAEARRAAIDPTRSLVVQAPAGSGKTALLIQRYLALLARVETPEEILALT
FTRKAAEEMRSRVLAALTADFTVPGGNDYERELAALAQAAARAGEQRGWFLADCPGRLRI
QTFDAFCGQIVNQWPAAAGVGVALEVAQDPAALYAEAALATFAELGADDAVGQALAALLP
ALGNDVDRFVALVGELLGRREQWLPVVLETGSAAPEQARARLEGVFLRLAHEAMARARAL
FPEEALGPACAYLATITGDPDWQPAHLGADGVGALRLWQRLAGYFLTGGGGLRKQLKDWP
KDFGSTRAFMAQFGDPEGLAGALNALVAWGPCSYGDGQWQRLSALLRILPAASAQLQMVF
ARHGAWDFTEAALRALQALGTEGEPTAGALRLDRRLQHVLVDEFQDTSVLQYRLLERLTS
EWVPGEPRSLFVVGDPMQSIYGFRKAEVGLFFKLAREGLGSWPLESVTLSANFRSRAGLV
AWVNEAFARLLPKRFVSDEGAVPHAPATAVRGAGGAVRVHGLVDADMEGEADYVARLVGD
IRAQRPGVEIGILVRSRAHGHAIAAALTAAGLRFAGEELYSLGTRPVIRDLLALTETLLF
PAARLSALSGLRAPWCGLDLADLVALCEGDPRPLADILADEARVARLSADGRSRVARMRD
VLHAAQRQRGRVPLSRCVEEAWLALGGPAALATQTAFDEALVFFETLSECEVAGEVDIWQ
LRAHLQKLYAPPDPQASGLHILTIHKAKGLEYDVVICPGLGRRTRGDGRPLLLVQETEGP
RGTDLLLAPLKAHDEDKDALYDAVWGFAARRREHEVRRLLYVACTRAREDLHLIGHAQGK
DDGSVQTTGLWTVLWPVIGASFRQSCVACESGTGAVAPAPIGLRRIARGALTGVSPGPSP
VTGEEHASGVDAPVVFDWAGSRIRRIGIVVHALLAELADAGLPEGAGLPDALRTRIEGLL
YGQGFAAQDLRSARATVMEALTRTLQDADGRWILGPHANARNEYALSTFDGGAVLTARVD
RTFIDGEGVRWIIDYKTGRHEGADREGFLDRERERYGGQLARYARLFQDLDGRPVELGLY
FPLLAAFRHWRYEPGDQPRDG
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgggggtggtgatgacgagtgatgccgaggcccggcgcgcggccatcgac
ccgacccgctcgctcgtggttcaggcccccgccggatccggcaagaccgcgctcttgatt
cagcgctatctggcgctgcttgcgcgcgtcgagacccccgaggagatactcgcgctcacc
tttacgcgcaaggccgcagaagagatgcggtcgcgggtgctggcggccttgacggcggac
tttacggtccccgggggaaacgactacgaacgcgagctcgcggcactggcgcaggccgcc
gcgcgcgcaggcgagcagcgcggctggtttctcgcggattgcccgggacggctgcgcatt
cagaccttcgatgcgttctgtgggcagatcgtcaaccagtggccggcggcggccggtgtc
ggcgtggccctggaggtggcgcaggaccctgcggccctctatgccgaggccgcactggcg
acgttcgcggagctcggggctgatgatgccgtcggtcaggcgctcgcagcgctgctgccg
gcgcttggcaacgatgtcgatcgcttcgtggcgctggtcggagaactcttggggcgccgc
gaacaatggctgccggtggtgctcgagaccggatcggccgcccccgagcaggcgcgcgcg
cgtctcgagggggtgtttctgcgtctggcccatgaggccatggcgcgcgcccgcgccctg
tttccggaggaggcgttgggaccggcctgcgcgtatctcgctaccatcaccggtgatccg
gactggcagccggcgcatctgggcgccgacggggtgggggccttgcggctctggcagcgc
ctcgccgggtattttttgaccggcggcggggggttacgtaagcagctcaaggattggccg
aaggatttcgggtccacgcgtgccttcatggcgcaattcggtgatcccgaggggcttgcg
ggtgcgctcaatgcgcttgtcgcctgggggccgtgcagctatggcgatggccagtggcaa
cggctgtcggccttgctgcgtatcctgccggcggcctcggcgcagctccagatggtgttt
gcccgtcacggcgcgtgggacttcaccgaggccgcgctacgcgccctgcaggccttgggg
acggagggcgagccgaccgccggggcgctgcggcttgaccggcgcctgcagcatgtcctc
gttgatgagtttcaggacacctcggtcttgcagtaccggctgctcgagcgtctgaccagc
gagtgggtgccgggggagccgcgcagcctgttcgtcgtcggtgaccccatgcaatcgatc
tatggatttcgcaaggccgaggtcgggttgttcttcaagctcgcacgcgaaggacttgga
tcgtggccgttggaatcggtgaccctgagcgccaatttccgctcgcgcgcgggtctcgtc
gcgtgggtcaatgaggccttcgcgcgccttttgccaaagcgcttcgtgagtgacgagggc
gcggtcccgcacgcgcccgcgaccgccgtgcgcggcgccggcggcgcggtgcgcgtccat
gggctcgtggatgcggacatggagggtgaggccgactatgtggcgcggctggtgggcgat
atccgcgcacagcgcccgggggtcgagatcggcattctggtgcgctcgcgggcgcacggg
catgcgatcgcggcggcgctcaccgccgccgggttgcgcttcgcgggcgaggagctctac
tccctggggacccgtcccgtgatccgcgacctgctggcgctcaccgaaacgttgctgttt
ccggcggcgcgcttgagcgccttgagcggccttcgcgccccctggtgcgggctcgatctc
gccgatctggtagcgctctgcgagggagacccgcgaccgctggccgacatcctcgcagac
gaggcgcgcgtggcacgcttgagtgctgacggacgatcgcgtgtggcgcggatgcgcgat
gtattgcacgccgcccagagacagcgcgggcgcgtccccctatcgcgctgtgtggaggag
gcatggcttgccctcggcggacccgcggcactcgctacgcagacggcgttcgacgaggcc
ttggtctttttcgagacgttgtcggaatgcgaagtggcgggcgaggtggacatctggcag
ctgcgcgcgcacctgcaaaaactctacgcaccccccgatccacaggcctcgggcctgcat
atcctgaccatccataaggccaaggggctggaatacgatgtcgtcatctgtccggggctc
ggccgccggacgcgcggtgacgggcgcccgctgctgcttgtgcaagagaccgagggcccg
cgcggcacggacctcttgctcgcacccttgaaggcccatgatgaggacaaggatgcgctc
tacgatgccgtgtggggctttgccgcgcgccgtcgcgaacatgaggtgcgccggctgctt
tatgtggcgtgcacgcgcgcccgcgaggacctgcacctcattggtcatgcccaaggcaag
gacgatggttcagtgcagacgacaggcctttggacggtgttgtggccggtcataggggcg
agcttccggcagtcatgcgtggcatgcgaatccggcaccggggcggtggcgcccgcaccc
atcggtctgcgccgcatcgcgcgcggtgcgctgactggggtgtcgccgggcccctcgccg
gtcacgggcgaggagcacgcatcgggcgtcgatgcgccggtggtcttcgattgggcaggc
agccgtatccggcgcatcggtatcgtcgttcatgccctgttggccgagctcgccgatgcc
ggcctgccggagggcgcgggacttccggatgccttgaggacgcgcatcgagggtctcctg
tatggccagggattcgcggcgcaggatctgcggtcggcgcgcgccacggtgatggaggcc
ctgacccgcacgttacaggatgccgacgggcgctggatcctgggaccgcacgcaaacgcc
cgcaacgagtacgccctgagcacgttcgacgggggtgcggtgctcaccgcccgcgtcgat
cgcacgttcatcgacggcgagggcgtccgctggatcatcgattacaagaccggtcgccac
gaaggggctgatcgcgaggggtttctcgaccgcgagcgcgagcgctatggcgggcaactg
gcgcgctatgcgcgtctctttcaggatctcgatggccggcccgtggagcttgggctttac
ttcccgttactggcggccttccggcattggcgctatgagcccggcgaccaaccgcgggac
gggtga
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