Acidiferrobacter sp. SPIII_3: C4901_08870
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Entry
C4901_08870 CDS
T05469
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03030
DNA replication
acii03430
Mismatch repair
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4901_08870 (holB)
03430 Mismatch repair
C4901_08870 (holB)
03440 Homologous recombination
C4901_08870 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acii03032
]
C4901_08870 (holB)
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_08870 (holB)
Enzymes [BR:
acii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4901_08870 (holB)
DNA replication proteins [BR:
acii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4901_08870 (holB)
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4901_08870 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_5
Mg_chelatase
nSTAND3
AAA_33
AAA_22
RuvB_N
AAA_18
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AWP23428
LinkDB
All DBs
Position
1778604..1779554
Genome browser
AA seq
316 aa
AA seq
DB search
MLPWQKAAWDRVGDIERLPHALLLSGPPGIGKRLFAERLARRLVCEHTTACDACRACRLA
ANDNHPDVLIVRPQEGKTEITVDDARALNQFLVLTPHLATRRVVLVVDADRLNRSASNAI
LKTLEEPPSGSYLLCYLLLVSDAPTRLLPTIRSRCQNLILPRPTEEEGLSYLQAHQLPDP
GGLLALAHGAPLRALAWPHDAPAMAQRLFASLEAVALGRDSALEATEAWQASDMEMGLAF
LTEIAAAVTQVALTGTIARGWQGAQEGRLRALAARLDLEQMLGLWDEALETRGLLSAPLD
RRLMWDRLFLHVEPRG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttggcagaaggcggcatgggaccgcgtaggcgacatagagcgcctaccccac
gcgctgcttttaagtggaccacccggcattggaaaacgcctgttcgccgagcgcctcgcg
cgccggctggtgtgcgagcacaccacggcctgcgatgcctgtcgtgcctgccgactggcc
gcaaacgacaatcatccggacgttctgatcgtgcgcccgcaagagggcaagaccgagatc
acagtcgacgatgcccgggccctcaatcagtttctggtgctgacaccccatctcgcaacg
cgccgcgtggtgctcgtcgtcgacgccgaccgcctcaaccgatcggcctcgaatgcaatc
ctaaagaccctcgaagaaccgccctccggcagttatctgctctgttatctgctcttggtc
agcgatgccccgacccgcctcttgcccaccatccgctcgcgctgccaaaacctgatcctg
ccacgaccgacagaagaggaggggctttcctacctgcaggcccatcagctgccggacccg
ggagggctgttggcattggcccacggggcgccgctacgcgccctggcatggccgcacgac
gcacccgccatggcgcaacgactcttcgcgagcctggaggccgtggccctgggccgcgac
tcggcactggaggccaccgaggcctggcaggccagcgacatggagatgggattggccttc
ctgacggagatcgcagccgccgtgacgcaggtggcactgactggaaccatcgcccggggc
tggcagggcgcccaggaagggcgcttgcgtgctttggcggctcgactagacttggagcaa
atgctcggcctctgggatgaggcgctcgagacccggggtctgctcagcgcacccctggat
cgccgtctgatgtgggaccggctgtttttgcatgttgagccgcgagggtga
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