Acidiferrobacter sp. SPIII_3: C4901_09430
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Entry
C4901_09430 CDS
T05469
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acii03009
]
C4901_09430
Enzymes [BR:
acii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C4901_09430
Ribosome biogenesis [BR:
acii03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4901_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
TRAM
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
MTS
RrnaAD
DOT1
Methyltransf_15
Methyltransf_23
CMAS
Methyltransf_4
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AWP23522
UniProt:
A0A2Z3R844
LinkDB
All DBs
Position
complement(1874306..1875625)
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AA seq
439 aa
AA seq
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MKARQLPEDATCVIASLNHDGSGVGHCDGKVVFVDGALPGEEVRFRYVGRRRRYDTGAVR
EILVRSAKRVEARCAHFGVCGGCQLQHLEPAAQLSAKEGIVREAFAHIAQVDCADWAPPV
TGPVFAYRRKARLGARVVDKKGGLLLGFRERRHSYIAPLSYCHTLDARLGARLADVKALM
EGLSCPEAIPQIEFAAGDDAAALVLRHLRDLTAADLRALSAFGETQGLAMHVQAGGPETV
EYVGGPGEVLHYALPEFAVDLTFGPTDFIQVNGETNKAMVAQAVDWLGLHAGSRVLDLFC
GLGNFTFPIARRAASVFGIEGASALVDKARCNARANDLDNATFAVADLDAETLGDLLGDR
PFDAALLDPPRTGAMAAVKTLAARGVPRLVYVSCNPATLARDTQWLVREGGYRLARAGVV
DMFPQTHHIEAMALFMRDG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccggcagctgccggaggacgcgacctgtgtcatcgcctccctgaatcacgat
ggttccggcgtcggacattgcgatggcaaggtggtgttcgtggatggggcattgcccggt
gaggaggtgcggtttcgttatgtcggccgcagacgccgctatgacaccggcgcggtacgg
gagatcctggtgcgctccgccaagcgcgtggaggcgcggtgtgcgcatttcggggtgtgc
ggcggctgccagctccagcacctggagccggccgcccagctttccgccaaggagggtatc
gtgcgcgaggccttcgcccatatcgcgcaggtggactgtgcggattgggcgccccccgtg
acaggtccagtattcgcgtatcggcgcaaggcccggctcggggcgcgggtcgtcgacaag
aaaggcgggcttttgctgggatttcgtgaacgtcggcactcctatatcgcgcccttgtcc
tattgtcatacgcttgatgcgcggctcggtgcgcgtcttgccgacgtgaaggcgctcatg
gagggcctgtcctgccccgaggccatcccgcagatcgagttcgcggccggcgatgacgcc
gcggccctggtgctgcgccatctgcgcgacctgacggcggcggacctgcgggcgctttcg
gccttcggggagacccagggattggccatgcatgtccaggctggcgggcccgagaccgtg
gaatacgtgggcgggcccggcgaggtcttgcactatgccctgccggagttcgccgttgac
ctgaccttcgggcccacggatttcattcaagtgaatggtgagaccaacaaggccatggtg
gcgcaggcggtggactggctggggctgcacgccggcagccgcgtgctggaccttttttgc
ggtctcgggaacttcacattccccatcgcgcggcgtgcggcctcggtattcggtatcgag
ggcgcgtcggcgcttgtcgacaaggcgcgctgcaatgcgcgcgccaacgacctcgacaac
gccacgttcgcggtggcggatctggacgccgagaccctgggcgatctgctcggggaccgg
cccttcgacgcagcgctcctcgatccgccgcgcaccggggcgatggcggcggtcaagacg
ctcgcggcacgcggcgtgccgcgcctcgtctatgtatcatgcaatcccgcgaccctggcg
cgcgatacgcaatggctcgtgcgcgagggggggtaccgcttggcgcgcgcaggcgtcgtg
gatatgttcccgcagacccaccacatcgaggccatggccttgttcatgagggacggctag
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