Acidiferrobacter sp. SPIII_3: C4901_09445
Help
Entry
C4901_09445 CDS
T05469
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03410
Base excision repair
acii03430
Mismatch repair
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4901_09445 (recJ)
03430 Mismatch repair
C4901_09445 (recJ)
03440 Homologous recombination
C4901_09445 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_09445 (recJ)
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C4901_09445 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4901_09445 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C4901_09445 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AWP24988
UniProt:
A0A2Z3R4R1
LinkDB
All DBs
Position
complement(1877407..1879077)
Genome browser
AA seq
556 aa
AA seq
DB search
MTVPSVPPAIVEAVLDRLYAARGVGDRVAETRGLATLAAPDTLSGLEQATDALAGAMARG
ERILVIGDYDADGATGTALAVRGLRRLGAHDVHYLIPDRAREGYGLSAAIVARAATLGPQ
WILTVDNGINSLEGARTARERGLRLIITDHHLPGPTLPEAVAIVNPNQPGDRFPSKALAG
VGVVLYVLIALRRRLSAEHVALADLLDLVALGTVADCVPLDANNRVLVREGLRRMNAGRA
CAGIEALLLVSGRRPGRIYAQDLGFQIGPRLNAAGRLADMSVGVRCLLTDDRGEALALAR
ELDALNRERREREAQMQAEASARLAVSVEADTLSAGICLMEPHWHPGVVGILAGRLKDAY
KRPAIVFAPADDGSLRGSGRSVPTLNLRDTLAAIGERHAGLIRQFGGHAAAAGLTIAESD
YPRFAAAFAGEVERRIGRGPFIDARGDGVLQPEELTLALASAIRAGGPWGNGFPEPLFEG
LFGVMEAAVVKEAHLRLRLAVDGRDEPMKAVAFRCNQAPAIGSSIAVRYHLGIDDFGGRE
TLCLYVAEWSAVSPGP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgccatcggtgccgccggccatcgtcgaggcggtcctcgatcgtctctatgcg
gcccgcggggttggagaccgcgtcgcggagacgcgcgggcttgcgacgctcgccgcgccc
gataccttgagcggcctcgagcaggccaccgatgccctggcgggggccatggcgcggggt
gagcgcatcctcgtcatcggtgactatgatgccgatggggccaccggaaccgcccttgcg
gtgcgcggattgcgccgcctgggcgcgcacgacgtccattatctgatcccggatcgggcg
cgcgagggctatggtttgagtgccgccatcgtcgcgcgcgccgcgaccctggggccgcag
tggatcctgacggtcgacaatggtatcaacagtctcgagggcgcacgcacggcacgcgaa
cgcggtttgcgtctcatcatcaccgatcaccatctgcccggcccgacgctgcccgaggcg
gtcgccatcgtcaatcccaaccagcccggggatcgctttccgagcaaggccctggccggg
gtcggcgtggtgctctacgtgctgatcgcgctgcgccgaaggcttagcgccgagcatgta
gcgctcgccgaccttctcgatctcgtggcgctcggcacggtcgccgactgtgtcccgctc
gatgccaataatcgcgtgctggtgcgcgaggggctgcggcgcatgaatgccggacgcgcc
tgtgccggcatcgaggccttgctgctcgtgagcggcaggcgccccgggcggatctatgcc
caggatctcggtttccagatcgggccgcggctgaacgccgccgggcggctggccgacatg
agtgtgggcgtacgctgcctgctcacggatgaccgcggtgaggccttggcgctggcgcgc
gagctcgatgccttgaaccgcgaacggcgcgagcgcgaggcgcagatgcaggccgaggcc
agcgcgcgtctggcggtgtcggtcgaggctgacactttgagtgccgggatttgcctcatg
gagccgcactggcatccgggggtcgtcgggattctcgccggacgtctgaaggacgcctat
aagcggccggcgatcgtattcgcgcccgccgacgacggatccctgcgcggctccggccgc
agcgtgccgacgctcaacctgcgcgataccctggcggccatcggcgaacgccatgcgggt
ctgatccgccagttcggcgggcatgccgcggccgcgggccttacgatcgccgagagcgat
tacccgcgcttcgcggcggcgttcgcaggcgaggtcgagcggcgcatagggcgcggcccg
ttcatcgatgcgcgcggggatggcgtattgcagccggaggaattgaccctggcgctggca
tcggccatccgtgccggtggcccgtggggcaatgggttccccgaaccgttgttcgagggg
ctttttggggtgatggaggcggcggtggtgaaggaggcgcatctgcgcctgcggcttgcc
gtggacggccgtgacgaacccatgaaggccgtggcattccgctgtaaccaggcgccggcc
atcggcagctccattgccgtgcgctaccacctcgggatcgacgacttcggcggccgcgag
accctctgcctgtatgttgcggaatggtccgccgtgtcgcccgggccttaa
DBGET
integrated database retrieval system
