Acidiferrobacter sp. SPIII_3: C4901_12050
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Entry
C4901_12050 CDS
T05469
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
acii
Acidiferrobacter sp. SPIII_3
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acii03032
]
C4901_12050
03036 Chromosome and associated proteins [BR:
acii03036
]
C4901_12050
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_12050
DNA replication proteins [BR:
acii03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C4901_12050
Chromosome and associated proteins [BR:
acii03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C4901_12050
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C4901_12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
AWP23969
LinkDB
All DBs
Position
complement(2409607..2409885)
Genome browser
AA seq
92 aa
AA seq
DB search
MTKSELIQSLVASQPQLDQRDVELAVKGLLERMSNALQAGERIEVRGFGSFCLHHRPARL
GRNPKTGMSVQVPDRRVPHFKPGKELRERVDQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggaacttattcagagcctcgtggcgagccagccgcaattggaccagcgg
gatgtggagctcgcggtcaagggtctgctggaacgtatgtcgaacgccctgcaggccggc
gagcggatcgaggtgcgcgggtttggcagcttctgtctgcaccatcgcccggcgcggctc
ggacgcaacccgaagacgggcatgagcgtgcaggtgccggatcggcgggtcccgcatttc
aagcccgggaaggaattgcgggagcgcgtcgaccagtaa
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