KEGG   Acidiferrobacter sp. SPIII_3: C4901_12540
Entry
C4901_12540       CDS       T05469                                 
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
acii  Acidiferrobacter sp. SPIII_3
Pathway
acii03030  DNA replication
acii03430  Mismatch repair
acii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C4901_12540
   03430 Mismatch repair
    C4901_12540
   03440 Homologous recombination
    C4901_12540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acii03032]
    C4901_12540
   03400 DNA repair and recombination proteins [BR:acii03400]
    C4901_12540
Enzymes [BR:acii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C4901_12540
DNA replication proteins [BR:acii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     C4901_12540
DNA repair and recombination proteins [BR:acii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     C4901_12540
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AWP24050
LinkDB
Position
2509722..2510126
AA seq 134 aa
MTRVDFYLGGDGLARDTLACRLVETAHRHGHHVFLWVPKDEIDLWDERLWTFSDTSFVPH
APVGRADEPVLIGAELPHAGDCLVPLTADAPPSVTAFARVLEAVGATDSEKERSRTRFRH
YRRQGLEPVVHNLP
NT seq 405 nt   +upstreamnt  +downstreamnt
atgacgcgtgtcgatttttatctcggcggtgacgggctggcgcgcgatacgctggcgtgt
cggctcgtggagaccgcccacaggcacggccaccacgtgttcctgtgggtcccgaaagac
gagatcgacctatgggacgagcggctgtggacattttccgatacgagcttcgtgccgcac
gcgccggtgggtcgcgcagacgagccagtactcattggtgccgagcttccgcatgcgggg
gactgcctggtcccgttgaccgccgacgccccgccctcggtgacggcctttgcgcgcgtg
ctcgaggccgtgggggccactgacagcgagaaggagcggtcgcgcacgcggtttcgtcac
taccgccgccagggtctggaaccggtcgtccataacctcccatga

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