Acidiferrobacter sp. SPIII_3: C4901_12575
Help
Entry
C4901_12575 CDS
T05469
Name
(GenBank) DNA polymerase III
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4901_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_12575
Enzymes [BR:
acii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C4901_12575
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4901_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AWP24055
UniProt:
A0A2Z3R3A4
LinkDB
All DBs
Position
complement(2515270..2515926)
Genome browser
AA seq
218 aa
AA seq
DB search
MDSRSTRPWLKAMGITVWQRREPIAAANAPGACADAGEWGRLEDEVRSCVRCGLHAGRTQ
TVFGTGLRTATWCFVGEAPGAEEDRRGEPFVGRAGHLLDAMLRALALDREQVFIANVLKC
RPPGNRDPQPSEVAACLPYLRAQIAAVRPRVVVALGRFAAQSLLATDQPLGRLRGALHDY
EGIPVVVTYHPAYLLRRPADKAAAWADLKRARGVVADE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgtagcacacgcccgtggctcaaggccatggggatcaccgtctggcaacgc
cgagagcccatcgcggccgcgaacgccccgggggcttgcgcggatgcgggtgaatggggg
cgcctggaggatgaggtccgctcgtgcgtgcgctgcgggctgcatgccgggcgcacgcag
acggtattcgggacgggtttgcgcaccgccacatggtgtttcgtgggcgaggcgccgggg
gccgaggaggaccggcgtggcgagccctttgtcgggcgcgcgggccatctgctcgatgct
atgctgcgggccctggccctggatcgcgagcaggtctttatcgccaacgtcctaaagtgc
cggccgccggggaatcgggacccgcagccgtccgaagtggcggcatgcctgccctatttg
cgcgcacagattgccgccgtccgacctcgggtcgtggtggccctgggacggtttgccgcc
cagagcctgctggccacggaccagccgctcggcaggcttcgaggagccctgcatgactac
gagggcatcccggtggtggtgacgtatcatccggcctacctcttacggcgtccggcggac
aaggccgccgcctgggccgacctgaaacgcgcccggggggtcgtggccgatgagtag
DBGET
integrated database retrieval system
