Acidiferrobacter sp. SPIII_3: C4901_13810
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Entry
C4901_13810 CDS
T05469
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4901_13810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_13810
Enzymes [BR:
acii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4901_13810
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4901_13810
RecFOR pathway proteins
C4901_13810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
AAA_3
TIP49
nSTAND3
Rad17
RNA_helicase
AAA_14
DUF815
NTPase_1
Bac_DnaA
IstB_IS21
TsaE
ABC_tran
NACHT
AAA_18
TniB
NB-ARC
AAA_17
AAA_33
AAA_28
Sigma54_activ_2
AAA_25
AAA_24
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AWP24267
UniProt:
A0A2Z3R5L5
LinkDB
All DBs
Position
complement(2739362..2740378)
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AA seq
338 aa
AA seq
DB search
MIETERLVSLDGSTQERAQEVRLRPQRLADYIGQARLREKLEIFLAAARARQESLDHVLL
FGPPGLGKTTLAHIIASEMGASLRQTSGPVLERAGDLAALLTNLKAHDVLFIDEIHRLSP
VVEEVLYPAMEDFEIDILIGEGPAARSIKLNLPPFTLIGATTRAGLLTSPLRDRFGIVER
LEFYEVEDLARIVTRSAGLLGMSAEDAGVRALASCARGTPRIANRLLKRARDFAQVRGDG
LLTETVAKEALKMLDVDDRGLDSLDRRLLWAVTDTFQGGPVGVDNLAAAIGEERGTIEDV
IEPFLIQKGYLMRTPRGRMATPRAYHLFGLATPPGDGP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgaacggctggtctcgctcgacgggtctacgcaggagcgcgcgcaggaa
gtccgactgcgcccgcaacgcctggccgattacatcggccaggcgcgtcttcgggaaaag
ctcgagatcttcctggccgctgcgcgtgcccgccaggagtcgttggatcatgtcctgctc
tttggtccgccggggcttggcaagacgaccctcgcgcacatcattgcctcggagatgggg
gcctctttgcgccagacctcgggtccggtgctggagcgggccggcgatctggccgccctg
ctcaccaacctgaaggcccacgatgtcttgttcatcgatgaaatccaccgcttgagcccg
gtggtcgaggaggtgctctatccggccatggaggatttcgagatcgatatcctgatcggc
gagggcccggcggcgcgctccatcaaactgaatctgccaccctttacactgatcggcgcc
accacccgcgccgggcttctgacctctcccctgcgcgatcgcttcggtatcgtcgagcgg
ctcgagttctatgaggtggaggatctggcgcgcatcgtgacacgctccgcgggtctcctt
gggatgtctgccgaggatgccggggtgcgcgccctggcctcgtgcgcgcgtggcacgccg
cgtatcgccaacaggcttttgaagcgtgcccgtgacttcgcccaggtgcgcggggatggt
cttctgaccgagaccgtcgccaaggaggccttgaagatgcttgacgtcgatgatcgcggt
ctggatagtctcgaccgccgtctgctgtgggcggtgaccgatacttttcagggtggtccc
gtcggagtcgataatctcgcggcggccatcggcgaggagcgcggcacgatcgaagacgtg
atcgagccctttctcatccagaagggttatctgatgcgcaccccgcgcgggcgcatggcc
acgccccgcgcttaccatctcttcgggttggcgacgccgcccggggatggcccgtga
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