Acidiferrobacter sp. SPIII_3: C4901_13815
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Entry
C4901_13815 CDS
T05469
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C4901_13815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_13815
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C4901_13815
RecFOR pathway proteins
C4901_13815
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
IMS_HHH
Lsr2
Motif
Other DBs
NCBI-ProteinID:
AWP24268
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Position
complement(2740375..2740944)
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AA seq
189 aa
AA seq
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MIGRLRGMVIERAPPQVLFEVQGVAYEVDLPLSTFGELPAAGEVVLYTHLLVREDAHLLY
GFLTAERRAWFRLLLKVNGVGPRVALALLSGLTDEELGACVHDGNVARLTRVPGIGRKTA
ERLLVELSGKVPSGGRTVTSRRDEAVCALQTLGYNEREAQAAVERAEKVAGPAASGETLI
REALRGMVR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgatcggccgattgcgcggcatggtgatagagcgcgccccccctcaagtgcttttcgag
gtccagggtgtggcctatgaggtggatcttccgctctcgaccttcggcgaattgccggcg
gccggggaagtggtcttgtatacgcatctcctggtgcgcgaggacgcgcacctcctgtat
ggatttctcacggccgagcgccgtgcctggttccggctgctcctaaaggtcaacggtgtt
ggtccccgcgtggccctggcgctgctgtcgggactcaccgacgaggaactgggggcgtgc
gtgcatgacgggaacgtggcgcggcttacgcgcgtgccagggatcggccgcaagaccgcc
gagcgcctgctcgtggaactgagcggaaaggtgccgtctggcggacgaacggtgacaagt
cgccgcgatgaggcggtctgtgcattgcagacgctcggttacaatgagcgcgaggcgcag
gccgcggtggagcgggccgagaaggttgcggggccggcggcctcgggcgagacactgatc
cgcgaggcactcaggggaatggtgcgatga
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