KEGG   Acidiferrobacter sp. SPIII_3: C4901_13970
Entry
C4901_13970       CDS       T05469                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
acii  Acidiferrobacter sp. SPIII_3
Pathway
acii03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C4901_13970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acii03400]
    C4901_13970
DNA repair and recombination proteins [BR:acii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C4901_13970
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C4901_13970
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_23 nSTAND1 AAA_21 AAA_22 RsgA_GTPase BCA_ABC_TP_C NACHT AAA_25 nSTAND3 DnaJ_CXXCXGXG cobW Viral_helicase1
Other DBs
NCBI-ProteinID: AWP24297
UniProt: A0A2Z3R5P5
LinkDB
Position
2768834..2771710
AA seq 958 aa
MDLIRLRGVRTHNLKNLDLDLPRDRLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMAKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLYARVGEPRC
PRHDVALDAKTVTQMVDEALTLPPGTKAMVLAPVISGRKGEALNKLEELKARGYVRARID
GQVVELGEAPPLAKTQKHTVEAVVDRLVLRPGQESRLAESFENALSLSEGLVRLVTLPAD
GEAAQELLFSARYACPHCGFSLAELEPRIFSFNNPAGACPSCDGLGVRQFFDPERLVQDP
TLSLPAGAIRGWDRRNPFYFQLLESIARYYGVDIETPFEDLPKKVRQVILHGSGEESITF
TYVDRGRRHRRKHPFEGVIPNMERRYRETESASVRDELARFIGNQVCEACAGSRLREEAR
NVFIDARAIHEVTGLSIHEAHGFFQHLLLPGQRGVIAAKIIHEISERLKFLVNVGLDYLT
LARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNGRLLATLETLRDMGN
TVIVVEHDEEAILAADHVVDVGPGAGVHGGRIVAQGTPAQIMENPDSLTGKYLKGVEEIP
VPPIRRSGHGEIVIRGARGNNLRGIDVGIPVAALTCVTGVSGSGKSTLINDTLYAATANH
LNKTRLDVAAHAGIDGLEAFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRDLFAATVEAR
ERGFGPGRFSFNVRGGRCEACEGDGLVKVEMHFLPDMYVPCDVCKGMRYNRETLEIRYKG
RTIHEILQMTVEEALTFFEAVPAIRRKLETLTDVGLAYLTLGQSATTLSGGEAQRIKLAR
ELSKRDTGRTLYILDEPTTGLHFHDIRQLIGVLQTLTERGNTVVVIEHNLDVIKTADYLV
DLGPEGGSGGGRVVASGTPETLAAHLSSHTGRYLRQVLERHARPSAALAQDQKRVGKL
NT seq 2877 nt   +upstreamnt  +downstreamnt
atggacctcattcgtttgcggggcgtgcgcacgcacaacctgaaaaacctcgatctggat
ctgccgcgcgaccgtcttattgtcatcaccggactgtcgggctcgggcaagtcctcgctc
gcattcgacaccttgtacgccgaagggcaacgtcgctacgtcgagtccctgtccgcctac
gcgcggcagttcctgtcgctcatggccaaacccgacgtcgacctgatcgaagggctgtcc
cccgcgatctccattgaacaaaagagcacctcgcacaatcctcgctccacggtcgggacc
gttaccgagatctacgattacctgcgactgctctacgcgcgcgtgggggaaccgcgctgc
ccgcggcacgatgtcgccctggacgccaagaccgtgacgcaaatggtcgacgaggccttg
accctcccccccggaaccaaggccatggtcttggcgccggtcatatcgggacgcaagggc
gaggccttgaacaagctcgaagaactgaaggcgcgtggctatgtccgtgcgcgcatcgat
ggacaggtggtcgaacttggcgaggccccgccgcttgccaagacccaaaagcacacggtc
gaggcggtggtcgaccgcctggtgctgcgccctgggcaggagtcgcgactcgccgagtcc
ttcgagaacgccctgtcgctgtcggagggcctcgtacgcctcgtgaccctgcccgccgat
ggcgaggcggcgcaggaattgctgttctcggcgcgctacgcctgcccccattgcggcttt
agtctcgcggaactggagccacggatcttttctttcaataaccccgccggcgcctgtccg
agctgcgacggtctcggcgttcgccagttcttcgaccccgaacgcctcgtacaagacccg
accttgagcctgccggcgggcgcgatacgcgggtgggaccgccgcaacccgttctatttt
cagctcctggagtcgatcgcccggtactacggcgtcgatatcgagacccctttcgaggac
ctccctaaaaaggtccggcaggtcatcctgcatggcagtggcgaggagtcgatcaccttc
acctacgtggaccgcggacggcggcatcgacgcaagcacccgttcgagggcgtgatcccc
aacatggaacgtcgctatcgcgagacggagtcggcaagcgtgcgggacgaactcgcgcgc
ttcatcggcaaccaggtctgcgaggcctgcgccggcagccggctgcgcgaggaggcgcgc
aacgtattcatcgacgcgcgcgccatccatgaggtcacggggctatccattcacgaggcc
catggattctttcagcacctgctgctccccggccagcgcggggtgattgccgccaagatc
atccacgagatcagcgagcgcctcaaatttctcgtgaacgtgggcctcgattacctgacc
ctcgcgcgttccgcggagaccctgtccggcggcgaggcgcagcgcatccggctggcatcg
cagatcggtgcggggttggtcggcgtcatgtacgtcctggacgaaccctccataggcctg
caccagcgcgataatggccgcctgctcgcgaccctggagaccctgcgcgacatgggcaac
accgtcatcgtggtcgagcatgacgaggaggcgatcctggccgccgaccacgtcgtggat
gtcggccctggcgccggggttcacggcggacggatcgtggcccaagggacccccgcgcaa
atcatggaaaaccccgattccctgaccgggaaatacctgaagggtgtcgaggaaatcccg
gtaccgccgatccgccgtagcgggcacggcgagatcgtgatccggggggcgcgcggcaac
aacctgcgcggcatcgacgtcggcattccagtcgcggccctgacctgcgtgaccggggtc
tccgggtcgggcaaatccaccctcatcaacgacacgctgtatgccgccaccgccaaccat
ctgaacaaaacacgactggatgtcgcggcgcacgccggcatcgatggcctggaggccttc
gacaaggtcgtcgacatcgatcaaagcccgatcgggcggacaccgcgctccaatccggcc
acatataccggcctttttacccccctgcgggacctcttcgccgccaccgtcgaggcccgc
gagcgcgggttcggtccggggcggttctcgttcaatgtccgcggcggacgctgcgaggcc
tgcgagggcgacggtctcgtcaaggtcgagatgcacttcctgcccgacatgtatgtgccg
tgcgatgtctgcaagggcatgcgctacaaccgcgagacgctcgagatccgctacaagggc
cggaccatccacgagatcctacagatgaccgtggaggaggccctgaccttcttcgaggcc
gtcccggcgatacgccgcaagctcgagaccctgaccgacgtggggctcgcctacctcacc
ctcgggcagtcggcaacgaccctgtccggcggcgaggcgcaacgcatcaagcttgcgcgc
gagctctcgaaacgcgacaccgggcggacgctctacatcctcgacgagccgaccacaggc
ctccatttccacgatatccgccaattgatcggcgtcctccagaccttgacggaacggggc
aacaccgtggtcgtcatcgagcacaatctcgacgtcatcaagaccgcggattacctcgtg
gaccttgggccggaaggcgggagcggcggcggtcgcgtagtcgccagcggcacgcccgag
acattggccgcccacctctcgtcgcacaccgggcgctacctgcggcaggtcctcgagcgg
cacgcgcggccctccgcggccttagcccaggaccagaagcgggtcggcaagctgtag

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