Acidiferrobacter sp. SPIII_3: C4901_15665
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Entry
C4901_15665 CDS
T05469
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03420
Nucleotide excision repair
acii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4901_15665
03430 Mismatch repair
C4901_15665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_15665
Enzymes [BR:
acii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4901_15665
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4901_15665
MMR (mismatch excision repair)
Other MMR factors
C4901_15665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWP24584
UniProt:
A0A2Z3R3Z1
LinkDB
All DBs
Position
complement(3085461..3088373)
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AA seq
970 aa
AA seq
DB search
MSAVIWVSPSIIMRPDPMPGHAPRSRFGQGKKGGGRDRATAVTPQTARAFSGKPWRSCPT
GAARMNSPRLTGDALRAIRHRGSHLQIIACAGSGKTEVVAQRIADFFTEGVEPAAVVAFT
FTDRAAQSLKRRVEQRVAERLGEAFLGKMNGCFIGTIHSYCFHLLQTYVARYDNFDVLDE
HELTAFLMRVHRTIQLKAIDGQLFSSLKAFTRNLQVVENEAIETSQLQEPFGDILERFHE
ELESHKFLTFGQVITKAVEALDDPRVFTAVHDPLRHLVVDEYQDINPAQEALIARLATSP
VHVCVVGDDDQAIYQWRGSDVGNIVGFAGRYPNVASFAITVNRRSRPAIIKTANRFAKSI
EGRLEKEMRTHRDAGDIEVNCWRLSTEEEEAKRIAGTIAALAVKGFRYRDIAVLVRSSAS
YERLLAAFAAHKIPVQPGGRAGLFREADAQLFGRTFAYLAGYGWRPTTYAVEEPGTLDDL
VRAYGDRFALKGARRKRVYARLERWRLEAQDATGPADLVGDYYALLGDCGVSSWDLRDGC
AIARLGTIARCSGILVDFERTHRRPRLDPDVPGQVIGGQDRGEWYFRWLAIYIQNWALGE
WEGFDGEEAFTMDAVDLTTIHKAKGLEWPVVFVPGLTARRFPPQATGKPMTWLVPEQLFN
KARYEGSLNDERRLFYVAMTRARDWLSLSTHDRPNTQKVPPSPFIRDVAEKMSGYCEAIS
LPSVANAGNDESDILSVTVSELAEFKICGLAYRLRRLIGFQPPLAPELGYGKAVHHILRN
VAEYTRQHKEAPDSRWIEDLFDEEFYLPAASKPAHRQMRDGARRLVDRYVTSHGEDLKRT
WAVERPFELHLDNVVVAGRADVILGEEGGSHGALVVVDYKTATDNGQHVDRQLQIYVDAG
RREGLDIRAAYVHDLHAGARIAIDVAPDQIKAAEAEVLSVAARLRARDCPPSPGVVCRTC
DVRAMCRHAS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgtcatttgggtatccccctcaatcatcatgaggccggatccgatgcccggg
catgcgccgagatcgcgcttcgggcaaggcaagaagggtggcggccgtgatcgtgcgacg
gcagtcaccccgcaaacggcgcgagccttcagtggtaagccttggcgcagctgcccgacg
ggtgccgcgcgcatgaatagcccccgactcacgggagacgccttgcgggccattcggcat
cgtggatcccaccttcagatcatcgcgtgcgcgggttccggaaagaccgaggtggtcgcc
cagcgcatcgccgacttttttaccgagggtgtagagcccgcagccgtggttgcgttcacg
ttcacggatcgcgccgcccagtcgctcaagcgccgcgtcgagcagcgggttgctgagcgg
ctcggcgaggcatttttggggaagatgaacggatgtttcatagggacgatccattcttat
tgttttcatctccttcagacatatgtggcgcgttatgacaacttcgatgttctggatgag
catgaactaaccgcgttcctcatgcgcgtccacaggacaatccagttgaaggctatagac
gggcagctgttttcgtccctcaaggcgttcacccgcaaccttcaagtcgtggaaaacgaa
gccatagagacaagtcaattgcaagagccgtttggcgatatcctcgagcgattccatgaa
gagctcgagagccacaagttcctcacgttcggtcaggtgataacgaaggccgtggaggcg
ctcgacgacccgcgcgtattcacagccgtccatgatccactcaggcatctcgtcgtcgat
gagtatcaggatataaatcctgcgcaagaggcgctaatcgcacgtcttgcgacgtccccg
gtccatgtctgcgtggttggcgacgatgaccaggcgatctaccagtggcgcggctcggat
gtcggcaatattgtaggttttgcagggcgttatccaaacgtggcctcgtttgcgatcact
gtcaaccgccgtagccggccggccataattaagaccgcgaatcgttttgccaagagtatc
gaggggcgtctcgagaaggagatgcggacgcatcgagacgcaggggacattgaggtgaac
tgttggcgcctatcaaccgaggaggaagaagcgaagcgcatcgcgggaaccatcgcggcg
ctggccgtcaaggggttcaggtatcgcgatatcgcggtcctggtacggtcgtcggcgtcc
tacgaacgcttgctggcggcgttcgcggcccacaaaataccggtgcagccaggtggccgt
gcgggtctcttcagagaggcagacgcgcaactcttcgggcgcacctttgcgtacctggcg
ggctatggatggcgacccacgacttatgcggtcgaggagcccgggactctggatgatctt
gtgcgggcgtatggcgaccgattcgccctcaaaggtgcccgacgaaagcgagtgtatgca
cgcctcgagcgctggcgccttgaggcgcaggacgcgacggggccggcggatctggtgggc
gattattacgcgcttctgggtgattgtggtgtctcatcgtgggacctgcgggacggttgc
gcaatcgcacgtctcggcaccattgcgcgttgctcggggatcctcgtggacttcgagaga
acgcacaggcgtcctcgcctggaccctgatgtcccaggccaggtcattggcggacaggat
cgcggggagtggtattttcgctggcttgcgatctacatccaaaattgggcgctgggagaa
tgggaagggtttgacggagaagaggccttcactatggacgctgtcgatctgaccacgatc
cataaggccaagggcctggagtggcccgtcgtattcgtgcccggccttacggcgcggcga
ttcccaccgcaggcaacggggaagccgatgacctggttggtgccggagcagctgtttaat
aaggcgcgatacgaaggttccctcaatgatgagcgtcgcctcttctatgttgccatgacc
agggcacgggattggctatcgctgtctacgcacgatcggcccaatactcagaaagtccca
ccgtcgccgttcattcgtgatgtcgcggaaaagatgtcagggtattgcgaagcgatttcg
cttccatcagtagccaatgcgggaaatgatgagtccgatatcctgtccgtaaccgtttcg
gaactcgcggaattcaagatctgcgggctcgcataccgtttgcgcagactcatagggttt
cagccgcccctggctcccgagcttggttatggcaaggccgtgcaccatatcctgcgtaac
gtggccgaatacacgcgacaacacaaggaggcgccggactcccggtggatcgaggacctc
tttgatgaggaattttatctgccggcggccagtaagccggcccatcgccagatgagggat
ggggcacggcgcctggttgatcgatatgtcaccagccacggtgaggacctgaagcggacc
tgggcggtggagagaccgtttgagctgcatctggacaatgtggtggtggcgggaagagcg
gatgtcatactgggggaagagggcgggagccacggtgcgctggtcgttgtcgattacaag
accgcgacggataatgggcagcacgtcgatcggcagctgcagatatacgtggatgcggga
cgccgggaaggcctggatatacgcgccgcttatgtccatgacctccatgcgggcgctcgc
atcgccatagacgtggcgccggatcagatcaaggccgcggaagccgaggtcttgtcggtc
gcggcgcgactccgggctagagactgtccgccgagcccgggcgtggtttgccggacctgt
gatgtgcgggccatgtgtcgacacgcctcgtaa
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