Acidiferrobacter sp. SPIII_3: C4901_15995
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Entry
C4901_15995 CDS
T05469
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4901_15995 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_15995 (xth)
Enzymes [BR:
acii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C4901_15995 (xth)
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C4901_15995 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF8588
Motif
Other DBs
NCBI-ProteinID:
AWP24638
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All DBs
Position
complement(3153361..3154137)
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AA seq
258 aa
AA seq
DB search
MKIATWNVNSLRVRLAQVEAWLDDVAPDILCLQETKVQDADFPIPTFMARGYEVVFHGQR
TYNGVAIAARGPLSDITCGLADFADEQCRALAATFQGLRVASLYVPNGTAVDSPRYPYKL
GWLAALKGQSRVWLAQNPALVLAGDFNIAPEDRDVYDPAVWEGSVLVSAPERAAFRALID
TGLTDALGSLAGEGRGFSWWDYRAAAFRRDQGLRIDHILLGPPLAATFVRGYVDRKARAH
PRPSDHAPVVVELAWPPA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaacgtcaattccctgcgcgtgcgtctggcgcaagtcgaggcg
tggctggacgacgtcgcgccggatatcctgtgcctgcaggagaccaaggtgcaggatgcg
gacttcccgatcccgacgttcatggcgcgcggctacgaggtggtcttccatggccagcgc
acctataacggtgttgccattgccgcgcgcgggccgctcagcgacatcacctgcggtctg
gcggatttcgcagacgagcaatgtcgcgccttggcggccaccttccagggcctgcgcgtg
gcgagcctctatgtccccaacggcaccgccgtcgattcgccccgctacccttacaagctc
ggttggctcgcggcccttaaggggcagagccgggtctggcttgcgcaaaacccggccctg
gtcctggccggcgacttcaatatcgcccccgaggaccgggatgtctacgacccggcggtc
tgggagggttcagtgctcgtgagcgcacccgagcgggcggccttccgggccttgatcgac
acggggcttacggatgcgctcgggagcttggccggcgagggccgcggttttagctggtgg
gattaccgcgcggcggcgttccggcgcgatcaaggcctgcgcatcgatcacatccttctc
ggtccgccgctggccgcgaccttcgtgcggggttacgtggatcgtaaggcgcgcgcccac
ccgcggccctcggatcatgccccggtcgtagtcgagcttgcctggccgcccgcttag
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