Acidiferrobacter sp. SPIII_3: C4901_16385
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Entry
C4901_16385 CDS
T05469
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4901_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acii03000
]
C4901_16385
Transcription factors [BR:
acii03000
]
Prokaryotic type
Helix-turn-helix
Other families
C4901_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
Mg_chelatase
AAA
AAA_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AWP24706
UniProt:
A0A2Z3RB28
LinkDB
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Position
3237547..3239124
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AA seq
525 aa
AA seq
DB search
MDGRAGGKGCEDLREQEALFVRQAAGLLGRGLAPPVVLHEILHLLSELVGLNRGRIVLRD
DDGRGVIRHAYGLRHDEIARGIYATGEGITGKVLGGGRTIIVQDINDDPDYLQRAVPRAR
LPTGTVSFIALPIAMGGRIVGVLGVHRLRERCRPLAADLQILNTAAAFIGQIIHASEMVP
ARAMCADAGNREAPATPGEAATAPPMHGIIGASQPLRAALARTDRVARSEASVLMLGESG
TGKELFARALHLMSARRDGPFVRVNCGAIPENLFESELFGHERGAFTGAHATSIGRFEQA
HGGTLFLDEIADIPLPLQVKLLRALQERVIERLGGRRAIAVDTRIVAATNEDLQESVRAG
RFRLDLFYRLNVIPIRLPALRERPDDIPLLVDFHMRELSRAHGRVMRITPAALRRLAGYD
WPGNIRQLRNVVERLVLLADTDLIEAREVEQALAGELAPAAPYAAPAGLVRAYGRVAEHD
VEHIRNALRTARGNKSQAARLLGLTLRQFTYRLKRLGLEYVPPDC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggacggacgggcgggcggcaagggatgcgaggacctgcgcgaacaggaggcgctgttt
gtgcgccaggcggcgggcctgctcgggcgcggcctggcgccgccggtcgtcctccacgag
atcctccacctgctgtcggaactcgtgggcctgaatcgcgggcgcatcgtcctacgcgac
gacgacgggcgcggcgtgatacggcatgcctacggactgcgccacgacgagatcgcacgc
ggcatctacgccaccggcgagggcatcaccgggaaggtgttggggggcgggcgcacgatc
atagtgcaggacatcaatgacgatcccgactatctgcagcgtgcggtgccgcgcgcccgt
ctgccgacaggcaccgtatcctttatcgcgctacccatcgccatgggcggccggatcgtg
ggcgtgctcggggtgcataggctgcgcgagcgatgccggccgctggccgccgacctgcag
atcctgaataccgccgcggccttcatcggccagatcatccacgcaagcgagatggtcccg
gcgcgcgcgatgtgtgcggatgcgggcaaccgcgaggcgccggccaccccgggcgaagcg
gcgacagcgccccccatgcacggcatcatcggggcctcgcagccgctgcgcgcggcgctc
gcccggaccgaccgcgtggcgcgctcggaggcctcggtgctcatgctgggcgaatccggg
accggaaaagagctcttcgcccgcgccctgcacctcatgagcgctcgtcgcgacgggccg
ttcgtgcgtgtgaactgcggggcgataccggaaaacctgttcgagtcggaactgttcggt
catgagcgcggggccttcaccggtgcccacgccacttccatcgggcgcttcgagcaggcc
cacggcggcacgctgttcttggacgagatcgccgacatcccgctgcccttgcaggtcaag
ctgctgcgcgccctgcaggagcgcgtcatcgaaaggcttggcggccggcgcgccattgcc
gtggacacgcgcatagtggcggccaccaacgaggatctgcaagagtcggtgcgcgccggg
cggttccgcctggatctcttctatcgcctgaacgtgatccccatccgactgccggcgctg
cgcgagcgcccggatgacatcccgctgcttgtcgacttccacatgcgcgaactgtcacgc
gcgcacgggcgcgtcatgcgcatcacgccggcggcgttgcgcagactggccggctacgac
tggccgggcaatatccgccaactgcgcaatgtcgtcgaacggctcgtgttgttggccgac
accgacctcatagaggcccgcgaggtcgagcaggccctggccggggagctggcgccggcc
gcgccttacgccgcgccggcgggcctggtacgcgcctatggacgcgtcgccgaacacgac
gttgagcacatccggaatgcgctaaggaccgctcgcggcaacaagtcgcaggccgcgcgc
ctgctgggcctgacccttagacagttcacgtaccggctgaaacggctaggactcgaatac
gtgccgccagattgttga
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