Acidiferrobacter sp. SPIII_3: C4901_16905
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Entry
C4901_16905 CDS
T05469
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acii
Acidiferrobacter sp. SPIII_3
Pathway
acii03030
DNA replication
acii03410
Base excision repair
acii03420
Nucleotide excision repair
acii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4901_16905
03410 Base excision repair
C4901_16905
03420 Nucleotide excision repair
C4901_16905
03440 Homologous recombination
C4901_16905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acii03032
]
C4901_16905
03400 DNA repair and recombination proteins [BR:
acii03400
]
C4901_16905
Enzymes [BR:
acii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4901_16905
DNA replication proteins [BR:
acii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C4901_16905
DNA repair and recombination proteins [BR:
acii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C4901_16905
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4901_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AWP24788
UniProt:
A0A2Z3R471
LinkDB
All DBs
Position
complement(3354346..3357006)
Genome browser
AA seq
886 aa
AA seq
DB search
MIPSGNPGQLLLLVDGSSYLYRAFHAMPDLRNTRGEPTGAIYGVANMLRKLCADYKPRLV
AMIFDAPGGTFRDALYADYKATRTTMPDDLAVQIPRLHALIRALGIPLLAVPDVEADDVI
GTLAALGRAQGLKVVISTGDKDMAQLVSADVTLINTMTDQALDHEGVIARFGVPPEGIVD
YLAIVGDKVDNVPGVAGAGPKTAVRWLETYGSLDALMAHADDIPGRLGEALRAGLPQLRL
ARELVTIRCDVPLPLTLTELVPQPPDRDALRQLYGELEFKGWLSELGSEARGVPTTALTL
TDPEVIHAQAKAWRAAPLVALDLWDDDGRIAAVVVGTAEGAWMIPAADDLLNGPALEALL
AAVRPLFESGAPPLVVHDSKRILRFLIPENIGFAGSWDDVMLASYVLDSGAASHDLATLA
LKYLGRPIATRTTLLGEGRGRRGLPVVPPDERAAAAGDTVSALLALHEELLGRLAAQPGL
SHVYATIERPLSPVLARVEATGVPIDTAMLRAQSAELGIKLATLENRAHDLAGRVFNLNS
PSQIQDILFTELKLPIKKRTPKGQPSTAEEVLAELALDYPLPQLILDYRAVGKLKSTYTD
KLPSMVDPRTGRIHTTYHQAVAATGRLSSSDPNLQNIPVRTEEGRRIRQAFVAGPGQRIL
SADYSQIELRLMAHLSQDPGLVRAFQEGRDVHRATAAEVFGMTLDTVTDDQRRAAKAINF
GLMYGMSAFGLARQLRIDQARAQAYCDLYFRRYPGVHRYMEDMRATARRQGYVETLFGRR
LYIPDIKASHAGRRQYAERTAINAPLQGTAADLIKMAMLAVDAYLAETGLSARMIMQVHD
ELVFEVPEGEIPALREAVVARMEQVAALSVPLIAECGVGKNWDEAH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgataccgagcgggaatcctggacaactcttgctgttggtggacggctcatcctatctg
taccgggcgtttcacgccatgcccgatttgcgcaatactcgcggtgagccgacgggcgcg
atctatggcgtagccaacatgctgcgcaagttgtgcgcggattacaagccgcggctcgtc
gccatgatcttcgatgcccccgggggcaccttccgtgatgccctctacgccgattacaag
gcgacgcgcacgacgatgcccgacgacctcgcggtccagatcccgcggctgcatgccttg
atcagggccttgggtatcccgctgctcgcggtgccggatgtcgaggccgacgatgtgatc
ggcacgctcgccgcgctcggccgcgcccaaggcctgaaggtcgtgatctccacgggcgac
aaggacatggcgcagctcgtgagcgcggatgtaaccctgatcaacaccatgaccgatcag
gccctcgaccacgagggagtgatcgcccgcttcggcgtgccgcccgagggcatcgtcgat
tacctcgccatcgtcggcgacaaggtcgacaacgtcccgggcgtggccggcgccggcccg
aagaccgcggtgcgctggctcgagacctatggctcgctcgatgcgctcatggcgcatgcg
gacgatatccccgggcgattgggcgaggccttgcgcgcgggcctgccgcagttgcggttg
gcgcgcgaactcgtcaccatccgctgcgacgtgcccttaccgcttacgctcaccgaactc
gtgccgcagcccccggaccgggatgcgctccgccaattgtatggtgaactggagttcaag
ggctggctttccgagctcggcagtgaggcgcggggcgtcccgaccaccgcgttgaccctg
accgaccccgaggtcatccacgcccaggccaaggcctggcgcgcggccccgctggtagcc
ctcgatctatgggatgacgacggaaggatcgcggcggtggtcgtgggaacggccgagggt
gcgtggatgatcccggcggccgatgacctcttaaacggccccgcgctcgaggccttgctc
gccgccgtgcgcccgctctttgagagcggcgcgccccccctcgtagtccacgacagtaag
cgcatactccggtttctgataccagaaaacatcggctttgcggggtcatgggacgacgtc
atgctggcctcgtatgtcctggacagtggggccgcgagccacgacctcgccaccttggcc
ctgaaatacctgggccgtccgatcgcgacccggacgacgttgctcggcgaaggtcggggg
cgccgagggctcccggtggtcccacccgatgagcgggcggccgccgccggtgacaccgtc
tccgccctgctggccctgcatgaagagctgctcgggcggcttgccgcgcagcccggcctg
tcacatgtctacgcaacgatagagcgccctttgagtccggtgctggcgcgcgtcgaggcc
acgggcgtccccatcgataccgccatgttgagggcgcaaagcgccgagctcggtatcaag
ctcgccaccctcgagaaccgcgcgcatgacctcgcggggcgcgtcttcaacctcaactcg
ccctcccagatccaggatattctctttacggaactgaagcttccgatcaaaaaacgcacc
cccaaggggcagccgtcgacggccgaggaggtgctcgccgagctcgccctcgactacccc
ctgccgcagctcatcctcgattatcgcgcggtcggcaaactgaagagcacctacaccgac
aagcttccgtcgatggtggatccgcgcaccggccgcatccatacgacctaccaccaggcc
gtggccgccaccggtcgcctgtcctcgagcgacccgaacctccagaacatcccggtacgt
accgaggagggccggcgcatccgccaggccttcgtggccggccccggccagcgcatcctg
tcggccgattattcccagatcgagttgcgcctcatggcccacctgtcacaggacccgggc
ctggtgcgcgcctttcaggaggggcgggatgtgcatcgcgcgaccgccgccgaggtcttt
ggcatgacactggatacagtcacagacgaccagcggcgggcggccaaggcgatcaatttc
gggctcatgtatggaatgtcggcgttcggcctcgcccgccagctgcgcatcgaccaggcg
cgcgcccaggcctactgcgatctctactttcgccgctatccgggggtccaccgctatatg
gaagacatgcgcgccacggcccgccgtcaaggttatgtggagaccctgttcggccgccgg
ctctatatcccggacatcaaggcaagccacgccggacggcggcaatacgcggagcgcacc
gccatcaacgcccccctgcaaggcacggccgccgatctcatcaagatggcgatgctggcg
gtggacgcctacctcgccgagaccggccttagcgcacgcatgatcatgcaggtccatgac
gaactggtgttcgaggtcccggaaggggagatcccggccttgagggaggcggtggtggca
cgcatggagcaggtcgccgccctttcagtaccgctcatcgccgaatgcggcgtgggaaaa
aactgggacgaggcccactga
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