Acidipropionibacterium virtanenii: JS278_00989
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Entry
JS278_00989 CDS
T05538
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acij03016
]
JS278_00989 (truA)
Enzymes [BR:
acij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JS278_00989 (truA)
Transfer RNA biogenesis [BR:
acij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JS278_00989 (truA)
Prokaryotic type
JS278_00989 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AXE38172
UniProt:
A0A344USC4
LinkDB
All DBs
Position
complement(1092916..1093779)
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AA seq
287 aa
AA seq
DB search
MSGPAPTRRWRLDIAYDGAGFSGWAAQPGRRTVQGELERWIPRVLRLDRPVPLTVAGRTD
AGVHARGQVAHIDLPGGLDPRPDLVRRLGRVLEPDLAVRRLSAVPDAFDARFSALWRRYV
YRLWDADSRPDPLLRGHIVALREQLDLDLLNAAGASLLGLRDFAAFCKRRDGATTIRTLL
ECRATRLDDPCGTIELTVRADAFCHSMVRSLVGALTAVAASRRPRQWLDAVAASPTRASS
VVVMPAAGLTLEEVGYPDDEDLAGRAERARAVRSAHELDAGCGCDQT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccctgcccctacccggcgctggcgcctggacatcgcctacgacggcgccggc
ttctccggctgggccgcccagcccggccggcgcaccgtccagggagagctggagcgctgg
atcccgcgggttctccggctggaccgcccggttcctctgacggtggcgggacgcaccgac
gccggggtccacgcccggggacaggtggcccacatcgacctgccgggcggcctcgacccg
agaccggacctggtgcgtcggctcggccgggtcctggagcccgatctcgcggtgcggcgc
ctcagcgccgtccccgacgccttcgacgcccgcttctccgctctgtggcgccgctacgtc
taccggttgtgggacgccgactcgcgccccgacccgctgctgcgcggccacatcgtggcg
ctgcgggaacagctcgatctcgatcttctcaacgcggccggcgcatccctgctggggctt
cgggacttcgcggccttctgcaagcgacgcgacggcgccaccacgatccgcaccctgctg
gagtgccgggccacgcgcctcgacgatccctgcggcaccatcgaactcaccgtgcgcgcc
gacgccttctgccactcgatggtccgctccctggtgggcgccctcaccgcggtggccgcc
tcccgacgcccccggcagtggctcgacgcggtggccgcatccccgacccgcgcctccagc
gtcgtcgtgatgcccgccgccgggctcaccctcgaggaggtcggctatcccgatgacgag
gatctggccggacgcgccgaacgggcccgtgccgtacgcagcgcccacgagctggatgcc
ggctgcggctgcgaccagacgtga
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