Acidipropionibacterium virtanenii: JS278_01034
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Entry
JS278_01034 CDS
T05538
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acij
Acidipropionibacterium virtanenii
Pathway
acij03420
Nucleotide excision repair
acij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JS278_01034 (uvrD1)
03430 Mismatch repair
JS278_01034 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acij03400
]
JS278_01034 (uvrD1)
Enzymes [BR:
acij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JS278_01034 (uvrD1)
DNA repair and recombination proteins [BR:
acij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JS278_01034 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
JS278_01034 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXE38217
UniProt:
A0A344USG9
LinkDB
All DBs
Position
1137974..1140469
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AA seq
831 aa
AA seq
DB search
MSDATPDLFSFFATAPRDGEAAPRPAGRPDPAALARRPTTEEGLLAGLNGPQREAVLHAG
SPVLVVAGAGSGKTRVLTRRIAHLVQLRGVHPGSILAITFTNKAAAEMRARVVELVGNRA
RPMWVSTFHSAAVRMLRSDIDRLGMSRNFSIYDDTDAKRLITLVTRDASLDPKKFQPRAI
MNWISNQKNDLIDPPAAKDAATSGNDRTYAELYDEYQRRLRAANALDFDDLIMSVVTLLR
TCPDLREQYRRRFRHVLVDEYQDTNAAQYEFIRALCGREPVPPGDPEEEAAVRVDPPELM
VVGDSDQSIYAFRGATIRNILSFESDFPGATTILLEQNYRSTQTILTAANSLIKANPDRP
AKNLWTDAGDGERIVGYVADTEHDEAAWVARRIDSLVDAGSTSYGDVAVFYRTNAQSRPF
EDVFIRTGLPYRVVGGVRFYERREVRDAVAYLRAIANPADDVSVRRILNVPKRGIGARAE
ASLEVFATARRIPFSQAVDRVGEIGAMATRSVNQIRSFGELMARHRAMVDAGARADEILD
SILKDSGYIAELENSKDPQDETRLENLVELVSVAQEFVARAHTIDLAGGEDTEAEDVAAD
DSALEGDDSLPAFLEQIALVADSDSIPEEGEGVVTLMTLHTAKGLEFDTVFVTGFEDGVF
PHARSLGDSKELAEERRLAYVGLTRARKRLLISRAVVRTMWGTPQYNPPSRFIEEIPARL
IDWERLAEASPGWDWQSQDRSSSARESLDRDGASFSQAGSGRAFGSGKGPRHAPKSPVLS
LTPGDKVLHSTFGLGTVLATRGSGANTNVDVDFGSVGTKRLALKFAPLEKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgccacacccgatctgttctcattcttcgccactgctccgcgcgacggggag
gcggctccgcgccccgcgggccggcccgatcccgctgccctcgcacgacgtcccaccacc
gaggaaggccttctcgcaggcctcaacggacctcagcgcgaggccgtcctgcacgcggga
tccccggttctggtggtcgccggggcgggctcgggcaagacccgggtgctcacccgtcgg
atcgcccatctggtgcagctgaggggagtccatccgggttcgatcctggcgatcaccttc
accaacaaggcggccgccgagatgagggccagggtggtcgaactggtcggcaacagggcg
cgcccgatgtgggtgtcgacattccactccgcggccgtgagaatgctgcgctccgatatc
gaccggctggggatgtctcgcaacttctccatctacgacgacacggacgcgaagagactg
atcacactggtcacccgcgatgccagtctggacccgaagaaattccagccccgggcgatc
atgaactggatctcgaaccagaagaacgatctcatcgatccccccgcggccaaggatgcc
gcaaccagcgggaacgatcgcacctacgccgaactctacgatgagtaccagaggcggttg
cgcgccgccaacgccttggacttcgacgacctcatcatgtcggtcgtcaccctcctgcga
acctgcccggacctgcgcgaacagtaccggcggcgattccgccacgtcctggtcgacgag
taccaggacaccaatgccgcccagtacgagttcatccgggcgctgtgcggacgagagccc
gtccccccgggcgatccggaggaggaggccgcggtgagggtcgatccccccgaactcatg
gtggtgggggactccgaccagtcgatctacgccttccgcggtgccacgatccgcaatatc
ctcagcttcgagagtgatttccccggagccacgaccattctgctggaacagaactaccgc
tccacgcagacgattctcacggccgccaacagtctcatcaaggccaatcccgaccggccc
gcgaagaatctgtggactgatgccggcgacggagagaggatcgtcggctatgtcgccgac
accgagcacgatgaggccgcctgggtggcccgcaggatcgattccctggtcgatgccggg
agcacctcctacggggatgtcgcggtgttctatcgcaccaatgcccagtcgcgtcccttc
gaggacgtgttcatccgcaccggcctgccctaccgggtggtcggcggggtccgcttctac
gagcgtcgcgaggtgcgcgacgccgtcgcctacctgcgtgccatcgccaaccccgccgac
gacgtctcggtgcgacggatcctcaacgtccccaagcgcggcatcggtgcccgggccgag
gcctccctcgaggtcttcgccaccgcccggcggatccccttctcccaggccgtcgaccgg
gtcggcgagatcggtgcgatggccacccggtcggtcaaccagatcagatccttcggcgag
ctgatggcccgtcatcgcgccatggtggacgccggggcgcgggccgacgagatcctcgac
tcgatcctcaaggactccggatacatcgcggagctcgagaactccaaggacccccaggac
gagacccggctggagaatctggtcgagctggtctcagtggcccaggagttcgtggcccgc
gcccacaccatcgacctcgccggtggcgaggacacggaggccgaggacgtggcggccgac
gactcggccctggagggggacgactccctgcccgccttcctggagcagatcgccctggtc
gccgactccgactccatccccgaggagggggagggggtcgtcaccctgatgaccctgcac
accgccaaggggctggagttcgacacggtcttcgtcaccgggttcgaggacggcgtcttc
ccgcacgcccgatccctgggggattcgaaggaactcgccgaggaacggcgtctggcctat
gtggggctgacccgggcgcgcaagcgactgctgatctcgcgggccgtggtgcgcaccatg
tggggcaccccccagtacaacccgcccagccggttcatcgaggagatccccgcccgtctc
atcgactgggagcgcctcgccgaggcgtcaccgggatgggactggcagtcccaggaccgc
agcagctcggcacgggagagcctggaccgcgacggcgcatcgttcagccaggccgggtcc
gggcgggccttcggatcggggaagggcccacggcacgccccgaagagcccggtgctctcg
ctgacccccggtgacaaggtgctgcacagcacattcggtctcgggacggtgctggcgacc
cgggggagcggcgccaacaccaacgtcgacgtcgatttcggatcggtggggaccaagcga
ctggccctgaagttcgcgcccctggagaagctctga
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