Acidipropionibacterium virtanenii: JS278_01103
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Entry
JS278_01103 CDS
T05538
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
KO
K03530
DNA-binding protein HU-beta
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acij03032
]
JS278_01103 (hup)
03036 Chromosome and associated proteins [BR:
acij03036
]
JS278_01103 (hup)
03400 DNA repair and recombination proteins [BR:
acij03400
]
JS278_01103 (hup)
DNA replication proteins [BR:
acij03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JS278_01103 (hup)
Chromosome and associated proteins [BR:
acij03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JS278_01103 (hup)
DNA repair and recombination proteins [BR:
acij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JS278_01103 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF937
Mnd1
ABCA11_C
Motif
Other DBs
NCBI-ProteinID:
AXE38286
UniProt:
A0A344USN8
LinkDB
All DBs
Position
complement(1215299..1215574)
Genome browser
AA seq
91 aa
AA seq
DB search
MTKSELIKAIAKQASLTEAQTNEAVKALTDVITDALAKGDKIQLPGLLTAETVERPARNG
RNPRTGESMTIPAHKAVKLSASSTLKKAVSD
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctcatcaaggctattgccaagcaggcgtctctcactgaggcgcag
accaatgaggccgtcaaggctctcaccgacgtgatcaccgacgctctggccaagggcgac
aagatccagcttcccggcctgctcaccgccgagaccgtcgagcgcccggcccgtaacggc
cgcaatcctcgtaccggtgagtccatgacgattcccgcccacaaggcggtgaagctgtcg
gcctccagcacgctgaagaaggccgtctccgactga
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