Acidipropionibacterium virtanenii: JS278_01239
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Entry
JS278_01239 CDS
T05538
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
acij
Acidipropionibacterium virtanenii
Pathway
acij00450
Selenocompound metabolism
acij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JS278_01239 (csd)
Enzymes [BR:
acij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
JS278_01239 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
JS278_01239 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
DinB
DUF7437
Motif
Other DBs
NCBI-ProteinID:
AXE38415
UniProt:
A0A344UT17
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All DBs
Position
1363451..1364734
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AA seq
427 aa
AA seq
DB search
MSEATAYDVEAVRADFPILSTRVGDHPLVYLDSANTSQKPQVVIDAVADHYAHHNANVAR
AMHKLGLESTQAYEGGRERIARFIGANRPEEVVALSNASEALNLCAHTLGSRLGPGDEVV
ISVMEHHSNLVPWQLVCQRTGATLRWYDITEEGRLDLEKAAREGLINEHTKVVSLALASN
VLGTVNPIGLIAEQAHAVGAVMVVDASQAVPQLPVDVSALGADLVAFTGHKMVGPTGIGI
LWGRYDLLAELPPFLGGGEMIEIVRMDHSTYAEPPHRFEAGTPPIAQMVGLAAAADYLDG
IGMAAIAAHERDLADYALEGLSGVAGLRILGPEEAVDRTGTISFSIEGVHPHDAMSIMDS
RGVAVRGGHHCARPLHERLGLQSSLRASGYLYTTRGEIDALVDAVEYARDFFTGRMSVGA
GSGRRQS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggccactgcgtacgacgtcgaggcggtccgcgcggacttcccgatcctgtcc
accagggtcggggaccacccgctggtctacctggactcagccaacacctcgcagaagccg
caggtcgtcatcgacgcggtggccgatcactacgcccaccacaacgccaatgtggctcgt
gccatgcacaagctgggactcgagtccacccaggcctatgagggcgggcgcgagcggata
gcgaggttcatcggggcgaaccgtcccgaggaggttgtcgcgctgtccaacgcgtcggag
gctctcaacctgtgcgcccacaccctgggttcgcggctggggccaggcgacgaggtggtg
atctccgtgatggaacaccactccaacctggtgccctggcagctggtctgccagcggacc
ggtgccacgctgcgctggtacgacatcaccgaggaggggcgcctggacctggagaaggct
gcccgcgaggggctcatcaacgagcacaccaaggtggtctctctggccctggcctccaac
gtgctcggtaccgtcaacccgatcggtctcatagccgaacaggcccacgcggtcggcgcg
gtgatggtggtcgacgcctcccaggccgtgccccagctgccggtcgacgtgtccgcgctg
ggcgcggacctggtcgccttcaccggccacaagatggtcgggcccaccggcatcgggatc
ctgtggggccgctacgacctcctcgccgaactgccgcccttcctgggcggcggcgagatg
atcgagatcgtcaggatggatcactccacctacgccgagccgcctcaccgcttcgaggcc
ggcacgccgccgatcgcccagatggtgggactggccgccgccgccgactatctcgacggg
atcgggatggccgccatcgcggcccatgagcgcgacctggccgactacgccctggagggt
ttgtccggggtggcggggctgcgcatactgggccctgaggaggctgtggaccgcacgggc
acgatctccttcagcattgagggtgtgcatccccatgacgcgatgagcatcatggactcc
cgaggtgtggcggtgcgcggtggccatcactgcgccaggccgctccacgagaggctgggc
ctgcagtcgtcgctgcgggcgtcgggctacctgtacaccaccagaggcgagatcgacgcc
ctcgtcgatgcagtggagtacgcccgggacttcttcaccgggcgcatgagtgtgggcgcc
ggttcagggaggcgacagtcatga
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