Acidipropionibacterium virtanenii: JS278_01320
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Entry
JS278_01320 CDS
T05538
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acij03016
]
JS278_01320 (truB)
Enzymes [BR:
acij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JS278_01320 (truB)
Transfer RNA biogenesis [BR:
acij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JS278_01320 (truB)
Prokaryotic type
JS278_01320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AXE38495
UniProt:
A0A344UT97
LinkDB
All DBs
Position
1444514..1445392
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AA seq
292 aa
AA seq
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MDSGLLIVDKPSGWTSHQVVGRVRRLMSTRKVGHAGTLDPMATGVLVVGVGRATRLLGHL
ALHDKDYTATIRLGVTTVTDDAEGDVVATADASALSEVRIAEAMAPLRGEIMQVPTAVSA
IKVNGKRSYARVRAGEAVELAARPVTVSRFQTVEVRREGEAVDVDVEVTCSSGTYVRALA
RDLGGSLGVGGHLTALRRTRIGPYTLPAEAVDLSEDAPRPGLMTMAEAARLSFPAVELDA
GQEADLRVGRRLEIVVPADPTAMISGASGEFLALYRPDPERPGWSRAVAVLV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggactccggcctgctgatcgtcgacaaaccctcggggtggacctcccaccaggtggtg
ggccgggtgcgccgactgatgagtacccgcaaagtgggacacgccgggaccctggatccg
atggccaccggtgtgctggtggtgggagtgggccgggccacccggctgctgggccatctc
gcccttcacgacaaggactacacggccaccatccggctcggggtcaccaccgtcaccgac
gacgccgagggggatgtcgtggccacggccgacgcctccgcgctgagcgaggtgcggatc
gccgaggcgatggcacctctacgcggcgagatcatgcaggtgcccacggcggtgagcgcc
atcaaggtgaacgggaagaggtcgtacgcccgggtgcgcgccggtgaggcggtggagctg
gccgccagaccggtgacggtgtcgcgattccagacggtcgaggtgcgacgcgagggggag
gcggtcgacgtcgatgtcgaggtgacctgttcctccggcacctatgtgcgcgctctggcc
cgtgacctggggggctcgctgggggtggggggccatctcaccgcgctgcggcgcacccgg
atcgggccctacacactgccggccgaggctgtcgatctgtccgaggacgctcctcggccc
ggcctgatgaccatggccgaggccgcgcggctcagcttcccggccgtcgagctggacgcc
ggccaggaggccgaccttcgggtcggcaggaggctggagatcgtcgtgcccgccgatccg
accgcgatgatctccggcgcgtccggggagttcctggccctctaccggcccgatcctgag
cgtcccggctggtcccgggcggtcgcggtgctggtctga
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integrated database retrieval system
