Acidipropionibacterium virtanenii: JS278_01342
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Entry
JS278_01342 CDS
T05538
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
acij
Acidipropionibacterium virtanenii
Pathway
acij02024
Quorum sensing
acij03060
Protein export
acij03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JS278_01342 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JS278_01342 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JS278_01342 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
acij02044
]
JS278_01342 (ffh)
Enzymes [BR:
acij01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JS278_01342 (ffh)
Secretion system [BR:
acij02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JS278_01342 (ffh)
Eukaryotic Sec-SRP protein
JS278_01342 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
CbiA
AAA_22
Zeta_toxin
AAA_30
APS_kinase
AAA_24
AAA_18
NPHP3_N
AAA_33
TsaE
Thymidylate_kin
AAA_16
6PF2K
DUF6596
VapE-like_dom
AAA
ABC_tran
AAA_25
MobB
NACHT
Motif
Other DBs
NCBI-ProteinID:
AXE38517
UniProt:
A0A344UTB9
LinkDB
All DBs
Position
1465428..1467008
Genome browser
AA seq
526 aa
AA seq
DB search
MFDTLQDRLAATFKGLRGKGRLTDADIDATARQIRIALLEADVNLGVVKDFVAAVKQRCR
GEELSKALNPTQQIIKIVNEELVEILGGQTRTVRFAKNPPTVIMLAGLQGAGKTTLAGKL
ARWFKDEGHSPLLAACDLQRPNAVTQLQVVGERAGVHVFAPEPGNGVGDPIQVARDSVEE
ARHKLYDVLIIDTAGRLGVDAELMQQAADIKAATDPSETLFVVDAMIGQDAVNTAVAFQE
GVGFDGVVLTKLDGDARGGAALSIARVVGKPIMFASSGEGLKDFDVFHPDRMASRILDMG
DMLTLIEQAEKAFDQEQSQAAAEKLMAGKGQFGLDDFLGLMRQMRQMGPMSKIMGMLPGV
GQMKSVSDIDEREVDRIEAIICAMTPAERADVGILNGSRRARIARGTGVEVRDVNNLVNR
FVDARKMMNQMSQGMGGGMMGSMARHGAKQQKKKQQKRRKGSSGNPAKRAAQEKGAREPA
AQPTGNPFGTPGGAPQSQEDLQKAMADFRMPPEMEKMFKQGDKGPR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacacactccaggaccgactcgccgcgaccttcaaggggttgcgcggcaagggg
cgtctcaccgacgccgacatcgacgccacagcccgtcagatccggatcgcgctgctggag
gctgacgtcaacctcggcgtcgtcaaggatttcgtcgccgccgtcaagcagcgctgccgc
ggcgaggagctgtcgaaggccctcaatccgacccagcagatcatcaagatcgtcaacgag
gaactcgtcgagatcctcggcggacagacccgcacggtgcgcttcgccaagaacccgccc
accgtcatcatgctcgccggcctccagggcgccggcaagaccacgctggccggcaagctg
gcccggtggttcaaggacgagggccactccccgctgctggcggcctgcgaccttcagcgg
cccaatgcggtgacccagctccaggtcgtcggggaacgtgccggggtgcatgtcttcgcc
cccgagcccggcaacggcgtcggcgacccgatccaggtggcccgcgactccgtcgaggag
gcccggcacaagctctacgacgtcctgatcatcgacaccgccggacggctgggcgtcgac
gccgagctgatgcagcaggccgcggacatcaaggcggccaccgacccgtcggagaccctc
ttcgtcgtcgacgcgatgatcggccaggacgcggtcaacaccgcggtcgccttccaggag
ggggtcggcttcgacggggtcgtgctcaccaaactcgacggcgatgcgcggggcggcgcc
gccctgtcgatcgcccgggtggtgggcaagcccatcatgttcgcctcctccggcgaaggg
ctcaaggatttcgacgtcttccaccccgaccggatggcctcgcggatcctcgacatgggc
gacatgctcaccctcatcgagcaggccgagaaggccttcgaccaggagcagtcgcaggcg
gccgccgagaagctgatggccggcaagggccagttcggcctggatgacttcctgggcctg
atgcgccagatgcgccagatgggcccgatgtcgaagatcatgggaatgctgcccggcgtc
gggcagatgaaatcggtcagtgacatcgacgagcgcgaggtggaccgtatcgaggcgatc
atctgcgccatgaccccggcggaacgggccgacgtcgggatcctcaacggctcccggaga
gccaggatcgccaggggcaccggcgtcgaggtgcgcgacgtcaacaacctcgtcaaccga
ttcgtcgacgcccgcaagatgatgaaccagatgagccagggcatgggcggcggcatgatg
ggctcgatggccaggcacggcgccaagcagcagaagaagaagcagcagaagcgccgcaag
gggtcctccgggaacccggccaagcgggccgcccaggagaagggggcccgcgaaccggcg
gcgcagccgaccggcaacccgttcggcacgccgggcggggctccccagtcccaggaggac
ctgcagaaggcgatggccgacttccggatgcctcccgagatggagaagatgttcaagcag
ggcgacaagggcccgcgctga
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integrated database retrieval system
