Acidipropionibacterium virtanenii: JS278_01645 Help Entry JS278_01645       CDS       T05538                                  Symbol srmB Name (GenBank) ATP-dependent RNA helicase SrmB   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism acij  Acidipropionibacterium virtanenii Brite KEGG Orthology (KO) [BR:acij00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:acij03400]     JS278_01645 (srmB) Enzymes [BR:acij01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      JS278_01645 (srmB)     5.6.2.6  RNA 3'-5' helicase      JS278_01645 (srmB) DNA repair and recombination proteins [BR:acij03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     JS278_01645 (srmB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 AAA_25 Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  AXE38809 UniProt:  A0A344UU61 LinkDB All DBs Position 1798796..1803373 Genome browser AA seq 1525 aa AA seqDB search MFREPVATWFRDVFAAPTPVQSATWSAVATGGHALVIAPTGSGKTLAAFLWALDRLTDPA RKPSNGVGVLYISPLKALGTDIEKNLRAPLTGIRNTAERLGQECRPVKVAVRTGDTPPAE RNRIARHPPDILITTPETLYLMLTSQARRVLAGVETVIVDEVHAVAGSKRGSHLALSLER LDALVGHDVQRIGLSATVRPPADVAAFLAGDRPVSVVSPRAAKQWDVGVRVPVADMSDLP DSPASDDEPLADPLLTGGNTDTLAVDVSDSALPTRASIWPWIEREVYAEVLAGRSTLVFV NARRTAERLTSRLNELWAAEHEPASLNPGGRRPPADIMAASEEVGHAPAVIARAHHGSVS KDERRRTEEDLRSGSLRCVVATSSLELGIDMGLVDRVIQIEAPPSVSSALQRIGRAGHSV GAVSRGSVYPKTRLDLLHAAVVTSRMLDGRIEALHIPRNPLDVLAQQTVAATVAAPDGLP LADWYAIVRRARPFAELPEQAMDRVIAMLTGSYASADLSDLRARLVLADGVLTARPGALR LATTSGGTIPDRGMYGVFLAGEGDGRRVGELDEEMVHESRVGDVFTLGASSWRIAEITRD QVRVTPAPGHTGRLPFWHGDDQGRPAELGRAIGAFTRRARSDPDLISSLGFLDGHAADNI RGFLDAQAEATGILPDDRHIVLERFHDEVGDWRIVVHSPWGRPVNAAWALAIGTRLVERL GIDAQAVAGDDGLVLRLPDTDTPPGADLVVFDPEEIADIVTSQVGDTALFAGRFRECAAR ALLLPRTDPGRRAPLWQQRLRAGQLLEAVRSHRDFPIIVETVRECLADVYDLPALRTLMS DLASHRVTVAEVTTDAPSPLASALLFTYTGAFMYSGDTPLAERRAAALSLDPDLLARLMG TLDLRELLDPGIIDEVVAELQHTRADRRARDDEGLVDLLSRLGPVPLDGLDARTVDDLDA GAAAERLGERVAQVRIGGVAHLAVAQDLGLLRDGLGIPVPAGHRATTTGDRDPLTQLMGR WARCHGPFTADEAARAFGLGVATAAGVLERSAGAGELVRGRFRDGQEASEYCHARVLARI RGRALARARDQVAPASPSALARFSLDWHRVSGGLRGADGVVEALDALSGAALPASVWESA VLPARVRDFAPAMLDELTSSGDILVLPTGAGTAADPVLRLVRPEDVDLFPGPTGAAGPDE QSATVLERIGSGSVLLGPLAGELGASRLSELVWGLVAAGLLAPDGFAPLRAHLAGGRRTA ARRRSFSRSRPRMARYAITSATTGPGTVPPNLVGRWHRVEPADSAPEQRLATAAGLLLDR HGILTRGSVPDDVEGGFAALYQVLARMEEAGKVMRGYLVEGLGGAQFAAPAVIDRLRTFA DGPDATGWPSGAGDPSASVLSAVDPASPYGAALDWPVQEGAAPSRSAGALVVIADGLLLA HLSRGGRHLGLFVDALPEGTDAESAVGMVVDALAGWLGRTGSRPVTIEKINGSPVHASPL AGVMRAHRAGITPKGMRIEGIHAGG NT seq 4578 nt NT seq  +upstreamnt  +downstreamnt atgttccgggaaccggtggccacctggttccgcgacgtcttcgccgcccccacccccgtt cagtcggccacctggtcggcggtcgccaccggcggccacgccctggtgatcgcccccacc ggatccggtaagaccctggccgccttcctgtgggccctggaccggctcaccgatcccgcc cggaagccgtcgaacggggtcggggtgctctacatctccccgctcaaggccctgggcacc gacatcgagaagaacctccgcgccccgctgaccggcatccgcaacaccgccgagcggctg gggcaggagtgccgcccggtcaaggtggcggtgcgcaccggcgacaccccgccggccgag cgcaatcgcatcgcccgtcacccgcccgacatcctcatcaccacccccgagacgctgtac ctgatgctcacctcacaggcccgacgggtgctggcgggcgtcgagaccgtcatcgtcgac gaggtgcacgccgtcgccggatccaagcgcggctcccaccttgccctgtccctggagcgc ctcgacgccctggtgggccacgacgtccagcgcatcggcctgtcggccaccgtccgcccg cccgccgacgtcgccgccttcctggccggagaccggccggtgtccgtcgtctccccgcgg gccgccaagcaatgggacgtcggggtgagggtgccggtcgccgacatgtcggatcttccc gactcaccggcctccgacgacgagccgctagccgacccgctgctgacgggtgggaacacc gacaccctcgccgtcgacgtctccgactcggcgctgcccacccgggcctccatctggccc tggatcgaacgcgaggtctacgcggaggtcctcgccggtcgctccaccctggtcttcgtc aacgcccggcgcaccgccgagcgcctcaccagccgactcaacgagctgtgggccgccgag cacgaacccgcctctctgaaccctggcggccggcggccgcccgccgacatcatggccgcc tccgaggaggtgggccacgccccggcggtgatagcccgcgcccaccacggctcggtgtcc aaggacgagcgcagacgcaccgaggaggacctgcggtcgggctccctgcgctgcgtggtg gccacctcctcgctggaactgggcatcgacatgggcctggtcgacagggtcatccagatc gaggccccgcccagcgtctccagcgccctgcagcgcatcgggcgcgccggccacagcgtc ggcgcggtctcccgcggctcggtctacccgaagacccgcctcgacctgctgcacgccgca gtggtcacctcccggatgctcgacgggcgcatcgaggccctccacatcccccgcaacccc ctcgacgtgctggcccagcagaccgtggccgccaccgtcgccgcacccgacggcctgccg ttggccgactggtacgccatcgtgcgccgcgccaggcccttcgccgagctgcccgaacag gccatggaccgggtgatcgccatgctcaccggctcctacgcctcggccgacctgtcggac ctgcgggcccgcctggtcctggccgacggggtgctcacggcccggcccggcgcgctgcga ctggccaccacctcgggcggcaccatccccgaccgcggcatgtacggcgtcttcctggcc ggggagggggacgggcgccgggtcggggagctcgacgaggagatggtccacgagtcgcgg gtcggcgacgtcttcaccctgggcgcctcgtcgtggcggatcgccgagatcacccgcgac caggtgcgcgtcacccccgcaccgggccacaccggacggctgcccttctggcacggagac gaccaggggcgccccgccgaactgggccgggccatcggcgccttcacccgccgggcgcgc tccgaccccgatctgatctcctccctcggcttcctcgacggccacgccgccgacaacatc agaggcttcctcgacgcccaggccgaggccaccggcatcctgcccgacgaccgccatatc gtcctggagcgcttccacgacgaggtcggcgactggcggatcgtcgtccacagcccgtgg ggccggcccgtcaacgccgcctgggcgctggccatcggcactcggctggtcgaacgcctc ggtatcgacgcgcaggccgtcgccggcgacgacggcctggtgctgaggctgcccgacacc gacaccccgccgggcgccgacctggtggtcttcgaccccgaggagatcgcggacatcgtc acctcccaggtcggcgacaccgccctgttcgccggacggttccgcgagtgcgccgcccgc gccctgctgctgccgcgcaccgacccgggacgccgcgcccccctgtggcagcagcggctg cgcgccggacagctgctcgaggcggtgcgatcccaccgcgacttcccgatcatcgtcgag acggtccgcgaatgtctggccgacgtctacgacctgcccgcactgcgcaccctgatgtcc gacctggcctcgcaccgcgtcacggtggccgaggtgaccaccgacgcccccagcccgctg gccagcgccctgctgttcacctacaccggcgccttcatgtactccggcgacaccccgctg gccgaacggcgggccgcggcgctgtccctggatcccgacctgctggcccggctgatgggc accctggacctgcgcgaactgctggaccccgggatcatcgacgaggtggtcgccgagctc cagcacacccgggccgaccggcgggcccgcgacgacgagggcctggtggatctgctgtcc cgcctgggaccggtgccactggacgggctggacgcccggacggtcgacgacctggacgcc ggcgccgccgccgagcggctgggggagcgggtcgcacaggtgcgcatcggcggggtggcc cacctggcggtggctcaggacctcggtctgctgcgcgacgggctcgggatcccggttccg gccggccatcgcgccacgacgacgggagacagggaccccctgacccagctgatgggccgc tgggcccggtgccacgggcccttcaccgccgatgaggcggcgcgcgccttcggactcggc gtcgccaccgccgccggagtgctggagcgctcggccggcgccggtgaactggtccgcgga cgtttccgggacggccaggaggcttctgagtactgccacgccagagtcctggcgcggatc cggggccgggcgctggcccgggcccgcgatcaggtggcgccggcctcgcccagcgcgctg gcccggttcagcctggactggcaccgggtctccggtggcctgcgcggcgccgacggcgtc gtggaggccctcgacgccctgtcgggcgcggcgctgccggcctcggtgtgggaatcggcg gtgctgcccgcccgcgtccgcgacttcgccccggcgatgctggacgaactcacctcctcg ggcgacatactcgtcctgccgaccggtgcggggacggcggcggatcccgtgctgcgtctg gtgcgccccgaggacgtcgacctgttcccggggccgaccggcgccgccggccccgacgag cagtcggcgaccgtgctggaacggatcggctccggatcggtgctgctggggccgttggcc ggcgagctgggggcctcccggctctccgaactcgtgtgggggctggtggccgccggactg ctggcacccgacgggttcgctccgctgcgcgcccacctggccggtggccgccgcaccgcc gcgcgacgccgctccttctcccgatcacgtcccagaatggcccgctacgccatcacctcg gcgacaacgggccccggcacagtgccccccaacctggtcggccgatggcaccgggtggaa ccggctgacagcgcacccgagcagcggctggcgaccgccgccggtctgctgctggatcgc catgggatcctcacccgcggatcggtgcccgacgacgtcgagggcggattcgcggcgctg taccaggtgctggcccggatggaggaggccgggaaggtcatgcgcggatacctggtcgag gggctcggcggcgcccagttcgccgcaccggcggtgatcgaccggctgcgcaccttcgcc gacggccccgatgccaccggctggccctcgggggccggggatccgtcggcgagcgtgctg tcggccgtcgatccggccagtccctacggtgcggcactggactggccggtgcaggagggc gccgcgccgtcgcgcagcgcaggggcgctggtggtgatcgccgacggcctgctgctggcc cacctgtcgaggggaggacgtcacctcggcctgttcgtcgacgccctgcccgaggggacc gacgccgagtcggcggtaggcatggtcgtcgacgctctggccggctggctgggacgcacc ggctcccgccccgtgaccatcgagaagatcaacggctccccggtccacgcctcgccactg gccggggtgatgcgggcccaccgggcgggcatcaccccgaaggggatgcggatcgagggg atccatgccggagggtga

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