Acidipropionibacterium virtanenii: JS278_01764
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Entry
JS278_01764 CDS
T05538
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acij03016
]
JS278_01764 (rnd)
Enzymes [BR:
acij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JS278_01764 (rnd)
Transfer RNA biogenesis [BR:
acij03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JS278_01764 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
PHBC_N
Motif
Other DBs
NCBI-ProteinID:
AXE38923
UniProt:
A0A344UUH5
LinkDB
All DBs
Position
1924505..1925761
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AA seq
418 aa
AA seq
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MTESDLPVLSAPAEGVPPLITTASALRRTAARLASGTGPVAIDTERAHGYRYDTRAYLIQ
LRREGAGSHLVDPAALDSDGPGSGLSPLAEALAGTEWILHAATQDMPCLVREGLRPSRIF
DTELAGRLLGLPRVGLGPMVEEYFGVHLLKEHSAADWSTRPLPADWLVYAALDVELLIPL
RDRLADDLAAAGKAGWALEEFEHLTRLGAELPDHLPEPDPSRWRRTSGLHDVRTRAGLEL
VKDLWWAREGVARRIDIAPGRIVNDRALSALGVRCGERVTLERDELLGSSGFRRGRARRH
TADWERALERARGTAEADYPPRQAPQEGPPPPRSWDRHHPDEAARWKAIRPAVNRRAEEL
DLPPENLISPDWLRRLAWQPPVDRSPVGIDAFLADLGARTWQRNLVCGELSRLLGGLR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagtccgacctgcccgtcctgagcgcccccgccgagggagttccaccactcatc
accaccgcctccgcgctgcggcggaccgccgcgcgcctggcctcgggcaccggcccggtg
gccatcgacaccgagcgggcccacggctaccgctacgacacccgcgcctacctcatccag
ctgcgccgcgagggggccggcagccacctggtggatcccgcagcgctggattccgacggc
ccaggctcggggctgtccccgctcgccgaggcactggcgggcaccgagtggatcctgcac
gccgccacccaggacatgccgtgcctggtccgggagggactacgtccctcccgcatcttc
gacaccgagctggcaggacggctcctcgggctgcccagagtgggtctgggacccatggtc
gaggagtacttcggcgtccaccttctcaaggagcactcggccgccgactggtccacccgc
ccgctgcccgccgactggctggtctacgccgccctggacgtggaactgctcatcccgctg
cgcgaccgcctcgccgacgacctcgccgcggccggcaaggccggctgggccctggaggag
ttcgagcatctgacccgcctcggcgccgagctgccggaccacctgcccgagcccgacccc
tcgcggtggcggcgcaccagcggcctgcacgacgtgcggacccgtgccgggctggaactc
gtgaaggacctgtggtgggcgcgcgaaggcgtcgcccgacgcatcgacatcgccccgggc
cggatagtcaacgaccgcgcgctctccgccctgggagtgcgatgcggtgaacgggtcacc
ctcgagcgcgacgagctgctgggctcctcgggattccggcgcggccgggcccggcgccac
accgcggactgggagcgtgccctggaacgggcccgcgggaccgccgaggcggactatccg
ccccgtcaggccccccaggagggccctccgccgccccgctcctgggaccgccaccatcct
gatgaggcggctcgttggaaggcgattcgcccggccgtgaaccgccgggccgaggagctg
gacctgcctcctgagaatctcatctccccggactggctgcgccggctggcctggcagccg
cccgtcgaccgttccccagtcgggatcgacgccttcctggccgatctgggcgccagaaca
tggcagcgcaatctggtgtgcggagaactctcacgcctgctgggcggcctgcgctga
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