Acidipropionibacterium virtanenii: JS278_01791 Help Entry JS278_01791       CDS       T05538                                  Name (GenBank) hypothetical protein   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism acij  Acidipropionibacterium virtanenii Brite KEGG Orthology (KO) [BR:acij00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acij03019]     JS278_01791 Enzymes [BR:acij01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      JS278_01791 Messenger RNA biogenesis [BR:acij03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      JS278_01791 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C DEAD HA2_C AAA_22 AAA_19 AAA_23 AAA_30 NACHT Ploopntkinase3 HA2_N T2SSE nSTAND3 TsaE ResIII SLFN-g3_helicase AAA_16 Motif Other DBs NCBI-ProteinID:  AXE38950 UniProt:  A0A344UUK2 LinkDB All DBs Position complement(1956348..1960277) Genome browser AA seq 1309 aa AA seqDB search MPAHASHLEGELPQGGTVRFDPDLPIAAHADEIAGLIADHQVIVVAGETGSGKTTQLPKI CLALGRRHIAHTQPRRIAARSVADRIAEEMGVEVGDQVGFQVRFTRRAGRETALTVMTDG VLLAEISHDRDLRAHDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTAR FSAHFDDAPIIEVSGRTFPVEVRYRPLDPAADLDPDDDSIAVSADPVDQTTGICRAVQEL AREGLGDILVFLAGEREIRDTADALADLRLRDTEVRPLFARLSAAEQHRVFTRHTGRRIV LATNVAETSLTVPGIRYVIDPGTARISRYSVRTKVQRLPIEPVSRASADQRAGRCGRVAP GICIRLYSQADFEARPEFTEPEILRTNLAAVILQMAQARLGAITSFPFVEPPDHSQISDG IRLLDELGALKPGHRDAPRLTRTGHQLAAMPIDPRMGRMILEGARQHSLREVLVIVAALS IPDVRERPAEKRAEADSFHARFRTDGALRTALGEAEGQDDDVHGGRRDGIDEGGDVLAAL RLWIYLRHRRKELSGSALRRMCRREYINFIRVREWQDLHTQLKQVCRDLKLERNTDDAPP DRILIALLSGLLSHIGLAEVRERADHRSGRRRRPGPREYLGARGARFAINPGSVLASHPP DLVMAVELVETSRLWARTVAAIRPEWVEEVGAHLLKRQYSEPHWATSTASVVATERATLY GVPIWADHQVNYARIDPVTAREIFIRSALVERDWRSRHGFLTHNDRTRAEAEELEERTRR RGLVADDDALYEFYDRRIPADIVSANHFDAWWRRVDDRHQLDLSVDDLVDPDAVRRDDFP DTWTVAGLELPVRYVFDPGSGHDGVTVTIPLALLNQVPAEPFSWQVPGLRTELATELIRN LPKRLRTRLVPAPDRAREALTWLESHDADLSADFCVELGRALRSLTGVVVEPGEWRPDAV PAHLRVGFDIVDAEGRSRPAGPKKPPRPDSAPLAHSEDLAGLRTGLAPKVSASLTRAAGE EQIHGATSWVFGTIPREVSLRRSGADAVGHPSLVDEGDAVGTAVRDSVTAQTRSHAGGVV RLLLINLPDPTNWTVAHLSNRTKLALSSSPYPSVPALLADSRRKAVASVAGRIAGDLSGV RDENAFDALALGVRQEAAETMARVVAAAGEILTAAGTARASLARLPQGPARTDMTRQIED LVFLNFISATPDPWYFRMVRWLQGISVRVEGLRTSPGRDDRGAAELDPLLDAYDELCGDQ PEGPLPPAVEEIGFLIEEFRIQLFAQRLGTHVPVSAKRIRTAMARLSRP NT seq 3930 nt NT seq  +upstreamnt  +downstreamnt atgccagcacacgcgtcacatctggagggtgaactgccccagggcggcaccgtccgattc gatcccgacctgcccatcgccgcccacgccgacgagatcgccggcctcatcgccgaccac caggtgatcgtggtggcaggggagaccggttcgggcaagaccacccagctgcccaagatc tgcctggccctggggcgcaggcacatcgcgcacacccagccccgacgcatcgctgcgcgc agtgtcgccgaccgcatcgccgaggagatgggcgtggaggtcggcgatcaggtcgggttc caggttcgcttcacccggcgtgccggccgcgagacggcgctgaccgtgatgaccgacggc gtcctgctcgccgagatctcccacgaccgggacctgcgcgcccacgacacgatcatcatc gacgaggcccacgagcgcagcctcaacatcgacttcctgctcggctacctcaagcagctg ctgccgaggcgtcccgatctcaaggtcatcatcacctcggcgaccatcgacaccgcgcgc ttctcggcccatttcgacgacgccccgatcatcgaggtctccgggcgcaccttccccgtc gaggtccgctaccggcccctggaccccgccgccgacctcgatccggacgacgacagcatc gcggtgtcagccgatccggtcgaccagaccaccggcatctgccgggccgtccaggaactg gcccgcgaggggctgggcgacattctcgtcttcctcgccggggagcgggagatccgcgac accgccgacgccctggcagacctgaggctgcgcgacaccgaggtaagaccgctgttcgcc cggttgtcggcagccgagcagcaccgcgtcttcacccggcacaccggccggcgcatcgtg ctggccaccaacgtcgccgagacctcgctgaccgtccccggcatccgctacgtcatcgac cccggcaccgcgcggatctcccggtactcggtgcgcaccaaggtgcagcggctgcccatc gaaccggtctcccgggcctccgccgaccagcgggccggacgctgcggccgcgtcgccccg ggcatctgcatcaggctgtactcgcaggccgacttcgaggcccgccccgagttcaccgaa cccgagatcctgcgcaccaatctcgccgccgtcatcctccagatggcccaggcccggctg ggcgccatcaccagcttccccttcgtcgaaccccccgaccactcccagatctccgacggc atccggctgctcgacgaactcggggcactgaagcccggccaccgcgatgcgccgcgcctg acccgcaccggccaccagctggccgcgatgccgatcgatcccagaatgggccggatgatt ctggagggcgcccgtcagcacagcctgcgggaggtgctggtgatcgtcgcagccctgtcc atccccgacgtgcgcgaacggcccgccgagaagcgggccgaggccgactccttccacgcc cgattccgcaccgacggtgcgctgcgcaccgccctgggcgaggcagaaggccaggacgac gacgtgcacggcgggcggcgcgacggcatcgacgagggcggcgacgtcctcgccgccctc cggctctggatctacctgcggcaccgtcgcaaggagctcagcgggtcggccctgcgcagg atgtgccgccgcgagtacatcaacttcatacgcgtccgcgaatggcaggacctgcacacc cagctcaaacaggtctgccgggatctgaaactcgagcgcaacaccgatgacgcgcctccc gaccgcatcctgatcgcgctgctgtcgggcctgctctcccacatcggactggccgaggtg cgtgagcgggccgatcaccgcagcggtcgccgacgccgtcccgggccccgcgagtacctg ggcgcccgaggggcgaggttcgccatcaaccccggatccgtcctggcctctcacccgccc gacctggtgatggccgtcgaactggtggagaccagcaggctgtgggcccgcaccgtcgcc gcgatccggcccgaatgggtcgaggaggtcggggcccacctgctcaagcgccagtactcc gagccgcactgggccacctccaccgcctcggtcgtggccaccgagagggccaccctctac ggggtgccgatctgggccgaccaccaggtcaactacgcccgcatcgatccggtcaccgcg cgcgagatcttcatccggtcggcgctggtggagcgcgactggcgatcccgccatggcttc ctcacccacaacgaccgcacccgggccgaggccgaggagctcgaggagcgcacccgccgg cgcggcctggtggccgatgacgacgccctctacgagttctacgatcgacgcatccccgcc gacatcgtctcggcgaaccacttcgacgcctggtggcgacgggtcgacgaccgccaccag ctggatctgtcggtcgacgacctcgtcgatccggacgcggtgcgccgcgacgacttcccc gacacctggacggtggccgggctcgaactcccggtgcgctacgtcttcgatccgggctcc ggccatgacggcgtcaccgtgacgatcccgctggccctgctcaaccaggtccccgccgag ccgttcagctggcaggtccccgggctgcgcaccgaactggccaccgagctcatacgcaac ctgcccaagcggctgcgcacccggctggtgcccgcccccgacagggcccgggaggccctc acctggctcgagagtcacgacgccgacctgtcagccgacttctgcgtcgagctcggacgg gccctgcggtccctgaccggggtggtcgtggagccgggggagtggcgtcccgacgcggtg cccgcccacctgagggtcggcttcgacatcgtcgatgccgagggccgcagccgccccgcc ggcccgaagaaaccgccccgtcccgactccgccccgctggcccactccgaggacctcgcc ggactgcgcaccggtctggccccgaaggtgtcggcgtcgctgacccgcgccgccggggag gagcagatccatggcgccaccagctgggtcttcgggacgattcctcgcgaggtgtcgttg cggcgcagcggggctgacgccgtcggccaccccagcctggtcgacgagggcgacgccgtg ggcaccgcggtgcgcgactcggtgaccgcccagacccgcagccacgccggcggcgtggtg cggctgctcctgatcaacctgcccgatcccaccaactggacggtcgcccacctgtccaac cgcaccaaactggcgttgtcgtcctccccctatccgagcgttccggccctgctggccgac tcgaggcgcaaggcggtcgcctccgtggccggacggatcgccggcgacctgtcgggagtg cgcgatgagaacgccttcgatgcgctggccctgggggtccgccaggaggctgcggagacc atggcacgggtggtggccgcggcaggggagatcctcaccgccgccggcaccgcccgggcg agtctggcccgactgccgcagggaccggcccggaccgacatgacccgccagatcgaggac ctggtcttcctcaacttcatctccgccacccccgacccctggtacttccggatggtgcga tggctccaggggatcagcgtgagggtcgaggggctgcgcaccagtccgggccgcgacgac cggggcgccgcagagctcgatccactcctggacgcctacgacgaactgtgcggggaccag cccgagggccccctgcccccggccgtcgaggagatcggcttcctcatcgaggagttccgc atccagctgttcgcccagcggctcggcacccatgttccggtctcggccaagcgcatcagg accgccatggcccgactgtcacggccctga

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