Entry |
|
Symbol |
gabR
|
Name |
(GenBank) HTH-type transcriptional regulatory protein GabR
|
KO |
K00375 | GntR family transcriptional regulator / MocR family aminotransferase |
|
Organism |
acij Acidipropionibacterium virtanenii
|
Brite |
KEGG Orthology (KO) [BR:acij00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:acij03000]
JS278_01861 (gabR)
Transcription factors [BR:acij03000]
Prokaryotic type
Helix-turn-helix
GntR family
JS278_01861 (gabR)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2028092..2029501
|
AA seq |
469 aa
MVNIPVRVDRSDERRLPVQLADGVRDLIASGVLGPGDALPSTRSTARRLSVSRGTVTAAF
DQLQAEGYLVAAHGSGTRVNPDLEKLHAEHRPRPAPPVAQPPAVVDLRPGIPDTSTLADP
AWRGAWREQVSRPGVVPADPLGDPGLRLEICDHLRRMRGLVTSPDRIAVTAGSREGLAAL
LRVWDRDRPLGIGVESPGYPSLRRVPTALGHRTVDLPTDAGGLRTADLPESGLDAVLVTP
SHQYPYGGSLAAPRRLELVAWARDHGVWLIEDDFDSELRHVGQPLPALAALAPDSTVLLG
TFSSVLTPSLACGYVVLPTTLVAPVRRLREALGQPVGGLVQGALARYMATGALRRRTQRL
RQIYRRRRGLVMEVLGGLPGSRLQPINGGLQAVLVCSADEDALVDGCTAAGVGVVPLSAY
WGGQGAGSGLVVGFGAHDDATLVTCLEQVAAVVRELSRVGLSGSSPESG |
NT seq |
1410 nt +upstreamnt +downstreamnt
gtggtcaacatccccgtccgggtcgaccgctccgacgagagacgcctgccggtccagctg
gccgacggcgtccgggatctcatcgcctcgggcgtgctcggccccggggacgccctgccg
agcacccggtcgaccgcccgacgcctgagcgtgtcgcggggcaccgtgaccgcggccttc
gatcagctccaggccgaggggtatctggtcgcggcccacggctcgggcaccagggtgaat
cccgacctggagaagctccacgccgagcaccggccccgcccggccccaccggtggcacag
cccccggccgtggtggacctgcgccccggaatccccgacacctccactctggccgacccg
gcctggcggggcgcctggcgggaacaggtctcacgccccggcgtcgtgcccgccgatccg
ctgggcgatcccggcctgcgcctcgagatctgcgatcacctgaggaggatgcggggcctg
gtcacgtcgccggaccggatcgcggtgacggccgggtcccgcgagggcctcgccgcgctg
ctcagggtctgggaccgggaccgacccctggggatcggcgtggagtcccccggctacccg
agcctgcgacgggtaccgaccgcgctgggccaccgcaccgtcgacctgcccaccgacgcc
ggcggcctgcgtactgccgatctgccggaatcagggctcgacgcggtgctggtgaccccg
agccaccagtatccctacggcgggtctctggcggccccccggcgtctggagctggtggcc
tgggctcgggaccacggcgtctggctgatcgaggacgacttcgactccgagctgcgccat
gtcggccagccgctgcccgcgctggcggccctggcgcccgacagcacagtgctcctcggc
accttctcctcagtcctgacgccgtcactggcctgcggctatgtggtgctgcccaccact
ctggtggcacccgtgcggagacttcgcgaggccctgggccagccggtcggcgggctcgtc
cagggagccctggcgcggtacatggccaccggcgcgctgcgccgccggacccagcgactg
cgccagatctaccggcgtcggcgcggtctggtgatggaggtcctgggcgggttgccggga
agccgcctccagcccatcaacggcggcctgcaggccgtgctggtgtgctccgccgacgag
gatgcgctggtggacggctgcacggcagccggcgtcggcgtcgttccgctgtcggcctac
tggggcgggcagggcgccggatccggcctggtggtcgggttcggcgcccatgacgacgcc
actctggtgacctgtctggagcaggtggcggcggtggtacgagaactcagcagggtcggg
ctcagtggatccagtccggagtcagggtga |