Acidipropionibacterium virtanenii: JS278_01918
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Entry
JS278_01918 CDS
T05538
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acij
Acidipropionibacterium virtanenii
Pathway
acij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JS278_01918 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acij03019
]
JS278_01918 (recQ)
03400 DNA repair and recombination proteins [BR:
acij03400
]
JS278_01918 (recQ)
Enzymes [BR:
acij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JS278_01918 (recQ)
Messenger RNA biogenesis [BR:
acij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JS278_01918 (recQ)
DNA repair and recombination proteins [BR:
acij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JS278_01918 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AXE39074
UniProt:
A0A344UUX6
LinkDB
All DBs
Position
2086313..2088457
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AA seq
714 aa
AA seq
DB search
MSDLRSQGLEILRRLTGRQDADFHPGQWEAIEALVAGHRRALVVERTGWGKSAVYFVASL
LQRRAGFGPTLIVSPLLALMRDQVAAAERAGVRAAAISSANVTEWDEIRGRLAADSVDVL
LVSPERLVNPRFAAEQLPELVERMGMLVIDEAHCISDWGHDFRPDYRRIRDLVAALPPGV
PVLATTATANSRVVTDVAEQIAPASAHRDGSADDDVFVLRGPLARDSLRLGVLTLARPEL
RLAWLCEHLAGLQGSGIIYCLTISAAEDTARALVEAGHQVRAYTGRTDAEERTELEAALK
DNRVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATDSADVLLLPGPE
DRDIWRYFATSSMPSQERADAVLAALAEGATLSTPALEARVDIRRNPLELLLKVLAVDGA
VERVSGGWRATGRPWVYDAERYGRIAAARRSEQDAMEHYERLDSCRMAFLTSQLDDPGSA
ACGRCDACAGPWYPTDVDPDQRARAQVTLDRVGVPVEPRRSWPSGLDRLGVALKGRIPPA
EQAAEGRVIARLSDLGWGGPLRDLFRTDDQGIPLDAEVPGPLAGACLRVLSDWDWDLRPA
GVVAIPSVGRPGLVGSLARGIARAGRLEYLGALDLAPGSGRLDPRVNSAFRVRDVCDRFR
VGEDLAAGLTRLDGAPVLLVDDLVTSRWTMAVAARLLRRSGAGTVLPFALGLSG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctgaggagccagggactggagatcctgcgccgtctcaccggccgccaggac
gccgatttccatcccggccagtgggaggcgatcgaggccctggtcgccgggcatcgccgc
gcactggtggtcgagcgcaccggctggggcaagtcggcggtctatttcgtcgcctccctg
ctccaacggcgggccggcttcgggccgacgctcatcgtctccccactgctggccctgatg
cgcgatcaggtggccgccgccgaacgcgcgggggtgagggccgcggcgatctccagcgcc
aacgtcaccgagtgggacgagatccgcgggcggctggccgccgactcggtcgatgtgctg
ctggtctcccccgagcggctggtcaatccccggttcgccgccgagcagctgcccgagctg
gtggagcggatgggcatgctcgtcatcgatgaggcccactgcatctcggactggggccat
gacttccggcccgactaccgccggatccgcgatctggtcgcagcgctgccaccgggggtg
ccggtgctggcgaccaccgccaccgccaattcccgggtggtgaccgacgtcgccgagcag
atcgccccggcctccgcgcaccgcgacggcagcgccgatgacgacgtcttcgtgctgcgc
ggccccctggcgcgggactcgctgcggctcggggtgctcaccctggcccgcccggagttg
aggctggcgtggttgtgcgagcacctggccgggctccagggctcggggatcatctactgc
ctcaccatctccgcggccgaggacacggcccgcgcgctggtcgaggcgggccaccaggtg
cgggcctacaccgggcggaccgacgccgaggagcgcaccgagctggaggccgccctcaag
gacaaccgggtgaaggcgctggtggccaccagcgccctgggcatgggcttcgacaagccc
gatctcggcttcgtggtccacctgggagcgccgagctccccggtcgcctactaccagcag
gtgggtcgcgcggggcgggccaccgactccgcggacgtcctgctgctgcccgggcccgag
gatcgcgacatctggcggtacttcgccacctcctcgatgccctcccaggaacgtgccgac
gccgtgctggcggccctggccgagggcgcgacgctgtccaccccggccctggaggcccgg
gtggacatccggcgcaaccccctggagctgctgctcaaggtcctggcggtcgacggcgcc
gtggagcgggtgagcgggggctggcgggccaccggacggccctgggtctacgacgccgag
cgctacgggcggatcgcagcggccaggagatccgagcaggacgccatggagcattacgag
cgcctggactcgtgccggatggccttcctcacctcccagctcgacgatccgggctcggcg
gcctgcggacggtgcgacgcctgcgcgggaccgtggtaccccaccgacgtggacccggac
cagcgagcccgcgcacaggtcaccctggaccgggtcggggtgccggtggagcccaggcgc
agctggcccagcggcctggaccgtctcggcgtggccctgaaggggaggatcccacccgcg
gagcaggcggccgaagggcgggtcatcgcccgcctctcggatctgggctggggcggaccg
ctgcgcgacctgttccgcaccgacgaccagggaatccctctcgacgccgaggtgccgggc
ccgctggccggcgcatgcctgcgggtcctgtcggactgggactgggacctgcggccggcc
ggggtggtcgccatcccgtcggtcggccgtcccggtctcgtgggatccctggcccggggc
atcgccagggccggcaggctggaatacctgggagccctggacctggcgcccggatcgggc
cggctggatccccgggtgaactcggccttccgggtccgcgatgtgtgcgaccggttccgg
gtcggcgaggatctcgcggccgggctgacccgcctggacggcgctcccgtgctcctggtc
gacgatctggtcaccagccggtggacgatggccgtcgccgcacggctgctgcgccgaagc
ggtgcaggaaccgtcctgccgttcgccctggggctgtccggctag
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