Acidipropionibacterium virtanenii: JS278_02815
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Entry
JS278_02815 CDS
T05538
Symbol
thpR_2
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acij03016
]
JS278_02815 (thpR_2)
Enzymes [BR:
acij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
JS278_02815 (thpR_2)
Transfer RNA biogenesis [BR:
acij03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
JS278_02815 (thpR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AXE39950
UniProt:
A0A344UXF2
LinkDB
All DBs
Position
complement(3045805..3046410)
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AA seq
201 aa
AA seq
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MYAALVPPAEVLRSIDETLERMSGRTPPSDPRRLRWSRPGDSHITLVFMAEVDDPDTLID
ALTEALAGRPPVAVGLGGAGAFPRPDRAKILWLGVADPAGTLPALARRARSAARSAGARP
ESGPFRPHVTAARAHDADVTGEIEALSSFGAPMWVARSVTLFASHLPRPGGRKGQGPRHE
PVAEIGLEGIPRRSQFRSPNQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcggcgctggtgccaccggccgaggtgctccggagcattgacgagaccctggag
cggatgtccgggcgtactccgccctcagacccgcgcaggctgcggtggagccggccggga
gactctcacatcaccttggtcttcatggcagaggtggacgatcccgacaccctgatcgac
gccctcacggaggccctggccggccggccgccggtggcggtgggactgggcggtgccggg
gccttcccgcggcccgaccgggcgaagatcctgtggctcggcgtcgccgaccccgccgga
accctgcccgccctcgccaggcgcgcccgttcggccgccagaagtgccggggcgcggccc
gagagcggcccgttccgcccgcatgtcacggccgcgagggcccatgacgccgacgtcacc
ggcgagatcgaggccctgtcgtcattcggcgcaccgatgtgggtggcccgttcggtgacc
ctcttcgcctcgcacctgccgcgtccgggcggccgcaagggccagggcccgcggcatgag
ccggtcgccgagatcggcctggaggggatcccccggagatctcagttccggtcgccgaac
cagtag
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