Acidipropionibacterium virtanenii: JS278_02886
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Entry
JS278_02886 CDS
T05538
Symbol
rcdA
Name
(GenBank) HTH-type transcriptional regulator RcdA
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acij03000
]
JS278_02886 (rcdA)
Transcription factors [BR:
acij03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JS278_02886 (rcdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_31
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
AXE40020
UniProt:
A0A344UXM2
LinkDB
All DBs
Position
complement(3124255..3124848)
Genome browser
AA seq
197 aa
AA seq
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MNRKGIANDPERKARIAQAALDLIAEGGIKAATYRKIAVAAAVPLGSVTYHYTSMDHILV
EAFTLFGNQLDPRYGIAIASAPTQMDARDVLVDAICGERRATQRELRLFREMYAYGSTSP
RVQDLVRSFEARSISALKGHFAEPAARAIDALVEGWWIYQSWTPGGLEPHMVRDAIDALA
DKFADGPGDAQYADNEA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgcaaaggcatcgccaatgaccccgagcgcaaggctcgaatcgcccaagccgcg
ctggacctcatcgccgagggtggaatcaaggcagcgacctacagaaaaatcgctgtcgca
gcagcggttccactcgggtcggtgacgtaccactacacatcgatggaccacattcttgtg
gaagcattcacattgttcggcaatcaactcgatccacggtacgggattgcgatcgcttcc
gcccccacacaaatggatgcgagagacgtcctcgtcgatgccatctgcggggagcgtcgc
gccacacagcgcgaacttcgtctgttccgtgagatgtatgcctacgggtcgaccagtcct
cgggtgcaagacctcgtacgatcctttgaagcgcgttcgatctccgccctcaagggccac
ttcgccgagccggcagcgcgggcaatcgacgccctcgtcgaaggatggtggatctaccaa
tcgtggacgcccggcggcctcgaaccgcacatggtgcgcgacgccatcgacgcgctggcg
gacaagtttgcggatggccctggcgacgcccagtatgcggacaacgaggcctga
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