Acinetobacter sp. Z1: NGC85_08180
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Entry
NGC85_08180 CDS
T11442
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acik Acinetobacter sp. Z1
Pathway
acik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NGC85_08180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acik03021
]
NGC85_08180
Transcription machinery [BR:
acik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NGC85_08180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_11
HTH_DeoR
GerE
HTH_24
HTH_28
DUF6395
KorB
DUF2795
Motif
Other DBs
NCBI-ProteinID:
UTO21046
LinkDB
All DBs
Position
complement(1754754..1755269)
Genome browser
AA seq
171 aa
AA seq
DB search
MNLNVEKQLWFSHVYKSQQSSLLSWFKHKLQHHHQSEDLSQEVFYRALKSDYCFENIKEP
QAWLMGIAKHVIIDYWRHQHVEHLYLDALAQLPEEYYPSAEYEVCIRETLYQVHLMLEKL
PQRTAQVFLLSQLDGLTYRAISEKLDISEATVKRDMKQAFLACISLYNQTD
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaacgtagaaaaacagttatggtttagccacgtttataaatcacaacaaagc
tcgttgttgtcatggtttaagcacaagctacagcaccaccatcaatctgaagatttgagt
caggaagtgttctaccgtgctttgaaaagtgactattgctttgaaaatattaaagaacct
caggcatggttgatgggcatcgccaagcatgtgattattgattattggcgacatcagcat
gttgaacacttatatttagatgcacttgcacagctaccagaagaatactatccctctgct
gaatacgaagtctgtattcgtgaaacgctttatcaagtgcatttgatgctggaaaagcta
cctcaacgcaccgcacaggtgtttttattatcgcaattggatggactgacctatcgtgcg
attagtgaaaaactggatatttcagaagcaacggtcaaaagagatatgaaacaggctttc
ttggcctgcataagtctttataatcagactgattaa
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integrated database retrieval system
