Acinetobacter sp. Z1: NGC85_13640
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Entry
NGC85_13640 CDS
T11442
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acik Acinetobacter sp. Z1
Pathway
acik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGC85_13640 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acik03021
]
NGC85_13640 (rho)
03019 Messenger RNA biogenesis [BR:
acik03019
]
NGC85_13640 (rho)
Transcription machinery [BR:
acik03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NGC85_13640 (rho)
Messenger RNA biogenesis [BR:
acik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NGC85_13640 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Sulfotransfer_1
AAA_22
AAA_25
S1CSD-TOTE-2
OB_RNB
AAA
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
UTO18952
LinkDB
All DBs
Position
2894558..2895826
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTSRVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
TT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaactgaactcaagaaaaaacccattggcgaactcattaaaattgcggagttt
atgggccttgaaggcatggcacgtaaccgtaaacaagatattatttttgccattttaaaa
cgccatgcgatgaatggtgaagaaatttttggtgatggtgttctcgaaattctttcagat
ggttttggcttcctacgctctgctgctggttcatatttagcaggaccagatgacatctat
gttagcccatcccaaattcgtcgttttaacttacgtactggtgataccattacaggtacg
attcgtccacctaaagaaggcgagcgttattttgccttattaaaagttaatcaaattaat
tacgatacgcctgaaaactcacgtaataaaattttatttgaaaacttgacacctttattt
ccaaccgaacagttggtaatggagctaggtaacggcacaaccgaagatttaacctctcgt
gttgtcgatttggttgcacctattggtaaaggtcaacgttcgattattgttgcaccgcca
aaagcgggtaaaacaatgttattacagaacattgcgcaatctatcgtccgcaacaatcct
gaagtattcttgattgttcttcttattgacgaacgtcctgaagaagttactgaaatggag
cgtactgttcgtggtgaagtgattgcatcaactttcgatgaagcacctgcccgccacgtt
caagttgctgaaatggtaattgaaaaagcaaaacgtttagttgaacacaagaaagatgtt
gtcattcttcttgactcgattactcgccttgcacgtgcttataacactgtcattccgtca
tcaggtaaagtactcactggtggtgtggatgcacatgctttagagcgtccaaaacgtttc
tttggtgctgcgcgtaatattgaagaaggtggctctctcacgattatctctactgcattg
attgaaactggcagtaagatggatgatgtaatttacgaagagtttaaaggtacaggtaac
caagagatcacacttgatcgtcgtattgctgagaaacgtgtattcccagcaatgaatatt
aagaaatctggtactcgtcgtgaagagcgtctgatggatgaagataacctacgtaaagtt
tggattttacgtaaactattacatccaatggatgagcttgccgcaatggaattcttatta
gaccgtatgaaagaaaccaaaacaaatgatgatttctttgatcagatgaagcgtaaagcg
acaacataa
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