Acinetobacter sp. Z1: NGC85_15600
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Entry
NGC85_15600 CDS
T11442
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
acik Acinetobacter sp. Z1
Pathway
acik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NGC85_15600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
acik02022
]
NGC85_15600
02035 Bacterial motility proteins [BR:
acik02035
]
NGC85_15600
Two-component system [BR:
acik02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NGC85_15600
Bacterial motility proteins [BR:
acik02035
]
Pilus system
Twitching motility proteins
NGC85_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
Mg_chelatase
AAA_3
HTH_50
VpsR
AAA_7
AAA_19
Neuropep_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UTO19306
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All DBs
Position
3295290..3296723
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AA seq
477 aa
AA seq
DB search
MATKQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKKFFTEFQYDACLTDLNLP
DGNGLDLVKHVTQNYPNTPIAVLTAYGNMDIAIAALKAGAFDFVSKPVNQTHLDQLIQKA
LNRPQPEQEAAETALENKLLIGRSAPIQQLRIALKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPVSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLELLVQQGRFRQDLFFR
IHVMDIVLPPLRERGQDILLLANHFIQRISQEWDLTAKSLSSRAEQFLLQQYFPGNVREL
RNIIERAITLSDDDNIDLAHLQTAPLRAPIASPTNISFSNQDETEQMQHSASPAMSSKKL
PPEGLERYLENIEKEILLNALNLTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEDDE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaacaacctctcgttctactcgtagacgatgaagaagacttatgtctttta
atgcaaatgacgctcgcacgaatgggtatcaaaactcaccttgcctatagagtcgagcaa
gcaaaaaaattctttactgagtttcaatacgatgcttgtttaaccgatttaaatcttcct
gatgggaatggtctagatttagttaaacatgtgactcagaactatcctaatactccaatc
gcggtactcactgcatatggcaatatggacattgcaattgcagcactgaaagcgggtgca
tttgattttgtgagcaaacctgttaatcagactcatttagatcaactcattcaaaaagcc
ttgaatcgacctcagccagaacaagaggcggctgaaacagctttagaaaataaactattg
attggtcgttcagcaccgattcagcaattaagaattgcattaaagaaaattgcacgttct
caggcacctgtttttattactggtgaatcaggaacaggcaaagaagtcgtagccaaccta
gtgcatcgcttaagtaatcgtagcgaaggtccttttattgccattaactgtggtgctatt
ccaactgaattgatggaaagtgaactgtttggacataaaaaaggaagctttacaggtgcg
actcaagacaagcaaggcttaattctttccgcgcatggtggcagtttatttttagatgaa
attgcagaattacctgtaagtatgcaggtgaaactgcttcgtgccgtacaagaaaagaaa
attcgtcctgtaggctcggatcaagaaattgatgttgatttccgtgtaataagtgccagc
catcaagatcttgagttattggttcaacaaggtcgcttcagacaagatttattcttccgt
attcatgtgatggatattgtgttaccgcctttacgcgaacgtggtcaagatattcttttg
ttggcaaatcattttattcaaagaattagccaagaatgggatttaacggccaaatcattg
tcctcacgtgcagaacaatttttattgcagcagtatttccctggtaatgtgcgtgaatta
cgcaatattattgaacgtgcaatcactctcagtgatgatgacaatattgatctcgcacat
ttacaaactgcgccgttacgagctccgattgcatcgccaaccaatatttcattttctaat
caagatgaaactgagcaaatgcaacactctgctagtccagccatgagttctaagaagctt
ccaccagaaggtttagagcgctatttagagaatattgagaaagaaattcttctgaatgca
ctcaacttaacccattggaatagaacattagctgctaaaaaattaggaatgacattccga
tctttacgctaccgtttgaaaaagtttggtttagatacagaagacgatgaataa
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