Candidatus Azoamicus ciliaticola: ESZ_00153
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Entry
ESZ_00153 CDS
T07098
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acil
Candidatus Azoamicus ciliaticola
Pathway
acil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESZ_00153 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acil03021
]
ESZ_00153 (rpoA)
03400 DNA repair and recombination proteins [BR:
acil03400
]
ESZ_00153 (rpoA)
Enzymes [BR:
acil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESZ_00153 (rpoA)
Transcription machinery [BR:
acil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESZ_00153 (rpoA)
DNA repair and recombination proteins [BR:
acil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESZ_00153 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CAB3976367
UniProt:
A0A6J5JZD4
LinkDB
All DBs
Position
1:120480..121481
Genome browser
AA seq
333 aa
AA seq
DB search
MSSFFDDFLKPKIVDIKDLTNNDISVVIEPLERGFGHTIGTALRRVLLSSMPGCAIVEAR
LSGVLHEFMIKDGVYDDVMDIMIKLSGICFKMHNKDNVELSLSKKGPCDVFASDFVLPPD
VKIINPDYYITTVDASGDLGIDIKVNKGRGCISSSEKIDFNKLDFSGWLKLDAYFSPINR
VSYEVENIRFKDRSDLDKLIINISTNGTISAIESLHWASKILSEQLSVFISFEKEKVDVK
SSVKDKINPELFKTVDNLELTVRSANCLKAENIYYIGDLVQRSEAELLKTPNLGKKSLAE
IKHVLHERGLSLGCKDNNWVKVLEEYKNDNNLK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttttttgatgattttttaaaacccaaaatagttgatataaaagatttaaca
aataatgatatttctgttgttatagaaccattagaaagaggatttggacatactattggc
acagcattacgtagagttttattatcttctatgcctggatgcgctatagtagaggcgaga
ttatctggtgttttgcatgaatttatgattaaagatggtgtttatgatgatgttatggat
attatgataaagttaagtggtatttgttttaaaatgcataataaggataatgttgagtta
agtttaagtaaaaaggggccgtgtgatgtttttgcgtctgattttgttttgccgcctgac
gttaagattattaatccggattattatataacaactgttgatgcatctggtgatttagga
atagatataaaagttaataaaggcagaggttgtatttcttcaagtgaaaaaattgatttt
aacaagcttgatttttctggatggttaaagcttgacgcttactttagtcctataaataga
gtaagttatgaggttgaaaatatacgctttaaagatagaagtgatttagataaattaata
attaatattagtactaatggaacaattagtgctatagaatctttgcactgggcgtctaaa
attttatctgaacaattatctgtctttataagttttgaaaaagaaaaagttgatgttaaa
tcttcagtcaaagacaaaattaacccagaattatttaaaacagtagataatttagagtta
acagtaagatcagccaattgtttaaaagctgaaaacatatattacattggagatttggtt
caaaggagcgaagctgaattattaaaaacacctaatcttgggaaaaagtctttagctgaa
attaagcatgttttacatgaaagaggtttatctttaggttgcaaggataataattgggtt
aaagttttagaagaatataaaaatgataataatttaaagtga
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