Candidatus Azoamicus ciliaticola: ESZ_00333
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Entry
ESZ_00333 CDS
T07098
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
acil
Candidatus Azoamicus ciliaticola
Pathway
acil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESZ_00333 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acil03021
]
ESZ_00333 (rpoB)
03400 DNA repair and recombination proteins [BR:
acil03400
]
ESZ_00333 (rpoB)
Enzymes [BR:
acil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESZ_00333 (rpoB)
Transcription machinery [BR:
acil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESZ_00333 (rpoB)
DNA repair and recombination proteins [BR:
acil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESZ_00333 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
CAB3976518
UniProt:
A0A6J5JW24
LinkDB
All DBs
Position
1:269161..272919
Genome browser
AA seq
1252 aa
AA seq
DB search
MINTENMLLSYTEKKCLRANFGEHIEKLKIPKLHNIQIKSYEKFIQENTGIETQRKNIGL
EYVLRSIFPIQSISKNSRLDYISYSISKPLFTAAECKIKGLTYASPLKLKLIFTKNINTK
KDKIKPLEQDVYILDMPLMTPKGTFIINGTERVIVSQLHRSPGLFFEIDKTKQNIYTNKI
SYIAKIIPHRGAWLDIEIDTKNCIFGRIDKKRKFPISILLKALNLTTEEIINVFENKSNN
TELQKNNEIEYKNYKNYIINTLKLENITKQNDAIIELYKIIRPDELISKDSAKQMFDTIF
FSSEKYDLSKIGRMKINKRLNTSNFKETVLCNDDIINIIKKLIDIKEGKDHIDDIDHLGN
RRVRSVGEIIENQFKTGFIKIEKSIKEKLTLAENDNLSPNDIVNAKPIAAMIREFFCSSQ
LSQFMDQINPLSEITHKRRVSALGPGGLTRERAGFEVRDVHNTHYGRICPIETPEGPNIG
LINSLAIYAKTDEYGFLETPYIKIENNKITNEIKYLSAIDESDFIIAQANAKINKKTMML
EEDQVSCRFKNEFIIISSNKVEYIDISPKQIVSVATALIPFLEHDDANRALMGSNMQRQA
VPLLRAEKPLVGTGMEKIVALDSGATVMAKRNGIIEKVDASRIIIKVNKDEIQNNEIGVD
IYNLIKYSRSNQNTCINQKPLVKKGDKINKDDIIADGPATDLGELALGQNLFVAFMSWNG
FNFEDSIIISENVVKENKLTSIHIEELICVARDLKLGPEEITSDIPNINNTALTKLDECG
IIYLGSEVTTGDILVGKVTKKSEVQLTPEEKLLQAIFGEKASDVKDSSLKVPQGITGTII
DIQIFTRDALKKDKRTLEIEDFKLKNIKKDLADELDILKKDILNELDALVLENKKTNQNT
LLTLDLIINTPIKEIKNIKIKNKEIKNKIIDKRIKLDEIHQENNLKLKELEEKIKRGDDL
PPGIIKMVKVSIAIKRRIQVGDKLSGRHGNKGVISIIVPVEDMPYLKNGKTIDIILNPLG
VPSRMNIGQVLETHLGWAAKELGKKLKHLKKEDAKNFIEKIYNIKNKNLDLNSFSQDELK
TLIKNLSNGIPIATPVFDGINEEEIKKLLQLADLPKHGKTILYDGRTSMPFENEITVGYQ
YIMKLNHLIDDKMHARSTGSYSLVSQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEM
LTIKSDDITGRTKIYKNVIDNNFQSEPGIPEAFNVLSKEILSLGLNIELDKE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgataaatacagaaaatatgctattatcatacacagaaaaaaaatgtttacgcgcaaat
tttggtgaacatatagaaaaattgaaaataccaaaattacacaatatacaaataaaatca
tatgaaaaatttatacaagaaaacacaggaatagaaacgcaaagaaaaaatataggatta
gaatatgtattacgttctatatttcctatacaaagcattagcaaaaattcaagattagat
tatataagttattctatatctaaacctttattcactgcagcagaatgtaaaataaaggga
ttaacttatgcaagcccattaaaattaaaactcattttcacaaaaaatataaatacaaaa
aaagataaaatcaaaccattagaacaagatgtatatattttagatatgccactaatgaca
ccaaaaggaacatttataataaatggtacagaaagagtaatagtttcgcaactgcataga
tctccaggattattttttgaaatagacaaaacaaaacaaaatatatatacaaataaaata
tcatatattgcaaaaataataccacatagaggcgcgtggttagatatagaaatagataca
aaaaattgtattttcggcagaatagataaaaaaagaaaatttccaatatcaatattgtta
aaagcactaaatttaactacagaagaaataataaatgtgtttgaaaacaaatcaaacaac
acagaattacaaaaaaataatgaaatagaatacaaaaattataaaaattatataataaat
acattaaaattagaaaatataacaaaacaaaatgacgctattattgaactctataaaata
ataagacctgatgaattaataagtaaagattcagcaaaacaaatgtttgatacaatattt
ttttcatctgaaaaatatgacttatctaaaattggaagaatgaaaataaataaaagatta
aatacctcaaattttaaagaaactgtattatgtaatgatgatataattaatataattaaa
aagctaatagatataaaagaaggaaaagatcacatagatgacatagatcatctaggtaat
agacgtgtacgaagtgttggagagataatagaaaaccaatttaaaacaggttttataaaa
atagaaaaatctataaaagaaaaattaactcttgcagaaaatgacaatttatcaccaaat
gacatagtaaatgcaaaaccaattgccgctatgatacgagaatttttctgttctagccaa
ttatctcaatttatggatcaaatcaatccattgtcagaaataacacacaaaagacgcgtt
tctgctttaggaccaggtgggttaacacgagaacgtgctgggtttgaagtaagagacgta
cataacacacattatggtagaatatgcccaatagaaaccccagaagggccaaacatcgga
ttaataaattcattagcgatatatgcaaaaacagatgaatatggatttttagaaacacca
tatataaaaatagaaaataataaaataactaacgagataaaatatctatccgctatagat
gaaagtgattttataattgctcaagcaaatgcaaaaataaataaaaaaacgatgatgtta
gaagaagatcaagtatcttgtagatttaaaaacgaattcataataataagcagcaataaa
gtagaatacatagatatatcacctaaacaaatagtttctgtagctacagctctaattcct
ttcttagaacatgatgatgcaaatagagcattaatgggatcaaatatgcaaagacaagct
gtaccactgttaagagcagaaaaaccacttgtaggaacgggtatggaaaaaatagttgct
ttagattctggagcaactgttatggcaaagagaaatggaataatagaaaaagttgatgcg
tcaagaataataataaaagtaaataaagatgaaattcaaaataatgagataggtgtagat
atatataatcttataaaatattcaagatccaatcaaaatacatgtataaaccaaaaacca
cttgtaaaaaaaggtgataaaataaataaagatgacataatagctgacggaccagcaaca
gacttaggtgaattagctttggggcaaaatttatttgtggcttttatgtcctggaatgga
tttaattttgaagattcaataataatatctgaaaatgttgttaaagagaacaaattaaca
agcattcatatagaagaattaatttgtgtagcaagagacttaaaactcggtccagaagaa
ataacttcagatattccaaacataaataatacagcactaacgaaattggatgagtgtgga
attatatatttaggttcagaagttacaactggagatattttagtaggtaaagtaacaaaa
aaaagtgaagtgcaactaacaccagaagaaaaacttttacaagccatttttggtgagaaa
gcttcagacgtaaaagattcgtctttaaaagtaccacaaggcataacaggtactataata
gatatccaaatatttacacgagatgctcttaaaaaagataaaagaactttagaaatagaa
gatttcaaactaaaaaatattaaaaaagatttagctgacgaattagacatattaaaaaaa
gatatattaaatgaactagatgcacttgttttagaaaataaaaaaacaaatcaaaataca
ttgttaactttagatttaataataaatacgccaattaaagaaattaaaaacataaaaatt
aaaaataaagaaattaaaaataaaataatagataaacgcattaaattagatgaaatacat
caagaaaacaacttaaaattaaaagaattagaagaaaaaataaaaagaggtgatgattta
cctccaggtataattaaaatggttaaagtctctatagcaataaaaagaagaatacaggtt
ggagataaattatctggcagacatggtaataaaggagttatatcaatcattgttcctgta
gaagacatgccatatttaaaaaatggcaaaacaatagatattatattaaatcccttaggt
gtaccatcaagaatgaatattggacaagttttagaaactcatttaggttgggcagcaaaa
gaacttggaaaaaaattaaaacatcttaaaaaagaagatgcaaaaaattttatagaaaaa
atttataatattaaaaacaaaaatttagacttaaattcattttcacaagatgaattgaaa
acattaataaaaaacctatctaacggcatacctatagcaacaccagtatttgatggtata
aatgaagaagaaattaaaaaattattacaattggctgatttaccaaaacatggcaaaaca
atattatatgacggaagaacaagcatgccttttgaaaatgaaataactgttgggtatcaa
tatataatgaaattaaatcatttaatagacgataaaatgcatgctagatcaacaggatca
tatagtttagtatcacaacaaccacttggtggtaaagctcaatttggtggacaaagattt
ggagaaatggaagtatgggcattagaagcatatggcgcagcttatacgcttcaagaaatg
ttaacaataaaatctgatgatattacaggtagaacaaaaatatataaaaacgtaatagat
aataattttcaatcagaaccaggcattccagaagcttttaatgtactttcaaaagaaatt
ttatcactcggattaaatatagaattagataaagaataa
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