Acidocella sp. MX-AZ03: GT370_13135
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Entry
GT370_13135 CDS
T08719
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acim
Acidocella sp. MX-AZ03
Brite
KEGG Orthology (KO) [BR:
acim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acim03016
]
GT370_13135 (thpR)
Enzymes [BR:
acim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GT370_13135 (thpR)
Transfer RNA biogenesis [BR:
acim03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GT370_13135 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WBO58175
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All DBs
Position
2378827..2379360
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AA seq
177 aa
AA seq
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MRLFVALDLPWEVKEELSELSCNLPGARWVPEDNFHLTLRFIGEANRLQAEEIDMALSAL
RGRGFTFSLSGLGWFEKNGRVNTLYAGVERNEHLARLQAKVETALHRVGLAPEKRRFTPH
VTLARMDMGVTPALTSFVQANNLYRSAPIRADNVTLFSSFLGKDQPTYTPEAEYALA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgttcgtcgcactcgacctcccctgggaggtcaaggaagaactcagcgagctt
tcctgcaatctgcccggcgcgcgttgggtgccggaggataatttccacctcactttgcgc
ttcatcggcgaggccaaccggctgcaggcggaggagatcgacatggcgctgagcgcgctg
cgcggacgcgggtttaccttctccctctccgggctcggctggttcgagaagaatggccgg
gtgaacacgctctatgccggggtggagcgcaatgagcatctggcgcggctgcaagcgaag
gtggagacggctttgcatcgcgtcgggctggcgccggagaagcggcgctttaccccgcat
gtgacgctggcgcggatggatatgggggtgacgcccgcgctgaccagcttcgtgcaggcg
aataatctgtaccgctcggcgccgatccgcgccgataacgtgaccttgttctcctccttc
ctgggcaaggaccagccaacctacacgccggaagccgaatacgccctggcttag
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