Acidovorax carolinensis NA3: CBP34_02175
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Entry
CBP34_02175 CDS
T04997
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
acin
Acidovorax carolinensis NA3
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acin03009
]
CBP34_02175
Enzymes [BR:
acin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CBP34_02175
Ribosome biogenesis [BR:
acin03009
]
Prokaryotic type
rRNA helicases
CBP34_02175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
ART53438
UniProt:
A0A240U7U0
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All DBs
Position
1:447495..448904
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AA seq
469 aa
AA seq
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MTSKENAASTDFSALALSPATLANLQQLGYTQMTPIQAASLPPALLGKDLIAQASTGSGK
TAAFALALLANLNPRRFAVQALVLCPTRELADQVTSEIRRLARAEENIKVVTLCGGVPLR
AQTLSLEHGAHIVVGTPGRVMDHLTRQHLSLEALNTLVLDEADRMLDMGFFDDIVVVAKQ
CPKERQTLLFSATYPEGIAKLSAQFMKTPVQITVQAQHAEGKIEQRWYEVKNSERLHAVS
QLLNHFRPESSIAFCNTKQQCRDLVGVLQAQGFSALALYGELEQRERDQVLVQFANRSCS
VLVATDVAARGLDIANLAAVINVDVTPDPEVHIHRIGRTGRGDAEGLALNLVSMDEMGSV
GKIEVLQGRESRWFPVAELTPTGSGPLVPPMVTIQIIGGRKEKIRAGDVLGALTGEMGFT
REQIGKINVNDFSTYVAVDRAIGAQAAQRLNQGRVKGKAVKARLVTGEE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaagaaaacgccgccagcactgatttcagcgcgctggccctgagccccgcc
acgctggccaatttgcagcagctgggctatacgcagatgacgcccatccaggcggccagc
ctgccgcccgccttgctcggcaaagacctgatcgcccaggccagcacgggcagcggcaag
accgccgcatttgccctggcgctgctggccaacctcaacccgcgccgctttgccgtgcag
gcgctggtgctgtgccccacacgcgagctggccgaccaggtcacctccgaaatccgccgc
ctggcgcgggccgaagaaaacatcaaggtcgtgaccttgtgcggcggtgtgccgctgcgc
gcgcaaacgctgagcctggagcatggcgcgcacatcgtggtcggcacgcctggccgcgtg
atggaccacctcacgcgccagcatctgagtctggaagccctgaacaccctggtgctcgac
gaagccgatcgcatgctcgacatgggcttcttcgatgacatcgttgtggttgccaagcag
tgtcccaaagagcgccagaccctgctgttctcggccacctaccccgaaggtatcgccaag
ctcagcgcccagttcatgaagacgccggtgcagatcacggtgcaggcccagcatgccgag
ggcaagatcgaacagcgctggtacgaggtgaagaacagcgagcgcctgcacgcggtgtcg
cagctgctcaaccacttccgtccagagtcgtcgattgcgttttgcaacaccaagcagcag
tgccgcgacctggtgggcgtgctgcaggcccagggcttcagcgcactggcgctgtatggc
gagctggagcagcgcgagcgcgaccaggtgctggtgcagtttgccaaccgcagttgctcg
gtgctcgtggccaccgacgtggcggcgcgcgggctggacattgccaacctggccgccgtc
atcaatgtggacgtgacgcccgaccccgaggtgcacatccaccgcatcggccgcacgggc
cggggcgacgccgaaggcctggcactcaacctggtcagcatggacgagatgggctcagtg
ggcaagatcgaagtgctgcagggccgcgaatcgcgctggttccccgtggccgaactcacg
cccacgggcagcggccccctggtgccgcccatggtcaccatccagatcatcggcggccgc
aaagagaagatccgtgcgggtgacgtgctgggagcactcaccggggagatgggcttcacc
cgcgaacagatcggcaagatcaacgtgaacgatttctcaacctatgtggcggtggaccgc
gccattggcgcgcaggctgcacaacgtctgaaccagggccgcgtcaagggcaaggccgtc
aaggcgcggctggtgactggcgaagaatga
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