Acidovorax carolinensis NA3: CBP34_03395
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Entry
CBP34_03395 CDS
T04997
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acin
Acidovorax carolinensis NA3
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acin03016
]
CBP34_03395
Enzymes [BR:
acin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CBP34_03395
Transfer RNA biogenesis [BR:
acin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBP34_03395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
ProQ_C
Myosin_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ART53466
UniProt:
A0A240U6K4
LinkDB
All DBs
Position
1:complement(718463..720535)
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AA seq
690 aa
AA seq
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MHALFEEAGKFMAGRILSEAESSAQVELDSGKRVKVKAANLLLKFEKPAPSELMAQAQAL
AQTIELPLAWEFAPEDDFGFADLARDYFSDNATLAQQAGALFALHEAPHYFRRAGKGRFK
KAPAEILQQALAAIEKKKLIVQQISDWAEALGRGECPQPIREQLYKILFRPDKNAPEYKA
VVEASRATHLAPLDLLQKAGAIDSAYQFHWKRFLFDNFPKGTGFPPLTAPQPPADLPLAP
VQAYSIDDSQTTEIDDALSVQGLGTGTVVLGIHIAAPGLAIVPGTPLDQLGRSRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTVNEATLEITGTETKLERVPVVANLRHDQ
LDHIVTEAWLTDPSIEVENTPQRLLDVRDQLSFLHRLAKSLKAQREVVRGKPENFNRPDY
NFRLVGNDKAEPNGSETVQITTRQRGAPLDLIVAEAAIVANSTWGSWMAELGVPGIYRSQ
ASMAPGVKVRMGTKALPHAGIGVKSYSWATSPLRRYVDLVNQWQIIACVRNGKTAALAAP
FKPKDAELFSIISSFDAAYSAYNGYQAGMERFWTLKYVEQNGITELNATVFKEGPGGSFL
VRADELPLVFPVLGAQNLPRGARLKVKLGEVDEITLDIHGTVIERLDDPDDTSDDGPVED
GEDDEAVAGPIAIAVDVNEAEGASPDNPAP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagaagccggcaaattcatggccggtcgtatcctgtccgaagct
gaaagctcggcccaagtcgagctcgattcgggcaagcgggtcaaggtgaaggcggcgaac
ctcctgttgaaatttgaaaagcccgcgccgtcggagctgatggcccaggcgcaggcgctc
gcccagaccatcgagctgccgctggcctgggaatttgcgcccgaggacgatttcggcttt
gccgacctcgcgcgcgactatttttcggacaacgccacgctggcccagcaggccggcgcg
ctgttcgccctgcacgaggcgccgcactactttcgccgcgccggcaagggccgcttcaag
aaggcgcccgccgaaatcctgcagcaggcactggccgccatcgagaaaaagaaactgatc
gtgcagcagatcagcgactgggccgaggccctggggcgtggcgaatgcccgcagcccatc
cgcgagcagctctacaagatcctgttccgtcccgacaagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcgccacgcacctggcgccgctcgacctgctgcaaaaggccggc
gccatcgactcggcctaccagttccactggaagcgctttttgttcgacaacttccccaag
ggcacaggcttcccgccgctcactgcgccgcagccgccggccgacctgccgctggcgccg
gtgcaggcctattccatcgacgactcgcagaccaccgagatcgacgacgccctgtcggtg
cagggcctgggcacgggcacggtggtgctgggcatccacattgccgcgccgggcctggcc
atcgtgccgggcacgccgctcgaccagctcggccgcagccgcctgtccaccgtctacatg
ccgggctacaagatcaccatgctgcccgacgaggtggtgcagatctacacgctggacgaa
ggccgtgccaatccggcggtgtcgctgtacgtcacggtgaacgaagccacgctggagatc
accggcaccgagacgaagctcgagcgcgtgcccgtggtggccaacctgcgccacgaccag
ctcgaccacatcgtcaccgaggcgtggctgaccgacccgtccattgaggtcgaaaacacc
ccgcagcgcttgctggatgtgcgcgatcagctatcctttttgcaccgcctggccaagagc
ctcaaggcccagcgcgaagtggtgcgcggcaagcccgagaacttcaaccggcccgactac
aactttcgcctcgtgggcaacgacaaggccgaacccaacggttcggaaaccgtgcagatc
accacgcgccagcgcggcgcgccactcgacctgatcgtggcagaggccgccatcgtggcc
aacagcacctggggcagctggatggccgagctcggcgtgcccggcatctaccgcagccag
gccagcatggcgccgggcgtaaaggtgcgcatgggcaccaaggcgctgccgcacgccggc
attggcgtcaaaagctattcgtgggccacctcgccgctgcgccgctatgtcgatctggtg
aaccagtggcagatcattgcctgcgtgcgcaacggcaagaccgcggccctggcggccccc
ttcaagcccaaggacgccgagctgttctccatcatcagcagctttgacgcggcctacagc
gcctacaacggctaccaggccggcatggagcgcttctggacgctgaaatacgtggagcag
aacggcatcaccgagctcaacgccaccgtgttcaaggaaggcccgggcggcagctttctg
gtgcgggcggacgagcttccgctggtgttccccgtgctgggtgcgcaaaacctgccgcgc
ggcgcgcgcctgaaggtcaagctcggcgaggtggatgagatcacgctggacatccacggc
accgtgatcgagcgcctggacgatcccgacgacaccagcgacgacggtccggtcgaggac
ggcgaggacgacgaagccgtggccgggcccatcgccattgccgtcgatgtgaacgaggcc
gagggcgccagccccgataatccagccccgtga
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