Acidovorax carolinensis NA3: CBP34_08675
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Entry
CBP34_08675 CDS
T04997
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acin
Acidovorax carolinensis NA3
Pathway
acin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBP34_08675
09124 Replication and repair
03420 Nucleotide excision repair
CBP34_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acin03021
]
CBP34_08675
03036 Chromosome and associated proteins [BR:
acin03036
]
CBP34_08675
03400 DNA repair and recombination proteins [BR:
acin03400
]
CBP34_08675
Enzymes [BR:
acin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CBP34_08675
Transcription machinery [BR:
acin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CBP34_08675
Chromosome and associated proteins [BR:
acin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CBP34_08675
DNA repair and recombination proteins [BR:
acin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CBP34_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ART51720
UniProt:
A0A240U2Y4
LinkDB
All DBs
Position
1:complement(1851926..1854313)
Genome browser
AA seq
795 aa
AA seq
DB search
MTYTVAVRELCEFTAKQGDLDLRFTPAPTALEGMAGHAVAAARRGAGYRAEVALSGSYQT
LQVRGRADGYDPERQRIDEVKTFKGRLDRQPASHRALHWAQAKVYGWLLCQQEQLAHIDV
ALVYLDVGTQQETVFTQRCAADDLRQHFEAQCQRFIAWAAQQMAHRTARDAALTALTFPF
GGFRTGQRPLAEAVYKAATAGCCLLAQAPTGIGKTMGTLFPLLKAVPAQQIDKVFFLAAK
TSGRQTALDALSRLSDRAPALPLRVLELVARDKACEHPGNACHGESCPLAQGFYDRLPAA
RAAAVANGEAGGTAALHQAQVRKVALQHQVCPYYLSQEIARWADVVVGDYNYYFDLGGLL
HGLTQANQWRTALLVDEAHNLVERGRKMYTAELRPAALAEARRSATAARHAPVKKALDKV
RRCWVALDKAQASAYAVHDTFPDKLLAALQQCGSTLTEHFTDHPTEPDAALQAFYFDALH
LVHMAELLGAHSMVDITQPTHSYNGKATTPGDSTLCIRNVVPAPFLQPRLAAAHTSTLFS
ATLQPARYYADLLGLPADHWWVDVESPFHAAQLQVQVARHISTRFPHRAASLHPIVALMA
RQFQARPGNYLAFFSSYDYLQQVAALFAQRHPEVPHWCQTRRMLEAEQRAFLDRFTPTSQ
GIAFAVLGGAFAEGIDLPGKRLVGAFLATLGLPQINPVNEQIRERMHALFGAGYDYTYLY
PGLQKVVQAAGRVIRTPSDEGVVHLMDDRFGHAQVRALLPHWWGLHPRAGTPVPRQDLDG
HAPLPLPRPASKISI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaccgtggcggtgcgcgagctgtgcgagttcacggccaagcagggcgacctg
gacctgcgcttcacgcccgcccccaccgcactggagggcatggcgggccacgccgtggcc
gcagcgcgccggggcgcgggctaccgggccgaggtggcgctgagcggcagctaccagacg
ctgcaggtgcgcggccgggccgatggctacgaccccgagcgccagcgcatcgacgaggtc
aagaccttcaagggccggctagaccgccagccggcatcgcaccgcgcgctgcactgggcg
caggccaaggtgtatggctggctgctgtgccagcaagaacagctggcgcacatcgacgtg
gcgctggtttacctggacgtgggcacccagcaggagaccgtgttcactcagcgctgcgcc
gccgacgacctgcgccagcactttgaggcgcagtgccagcgctttatcgcctgggccgca
caacagatggcccaccgcacggcgcgcgacgcggcgctcacggcgctgacctttccgttc
ggcggctttcgcaccggccagcgcccactggccgaagccgtgtacaaggccgccactgcc
ggctgctgcctgctggcacaggcgcccacgggcattggcaagaccatgggcacgctgttt
ccgctgctcaaggcagtgcctgcgcagcagatcgacaaggtgttttttctggcggccaag
acctcggggcggcagacggcgctcgacgccctctcgcgcctttccgaccgcgcccccgcc
ctgccgctgcgggtgctggagctggtggcgcgcgacaaggcctgtgagcacccgggcaac
gcctgccatggcgaatcgtgcccgctggcccagggcttttacgaccggttgccggccgca
cgcgctgccgccgtggcgaatggagaagccggtggcaccgcggcgctgcaccaggcccag
gtgcgcaaggtggcgctgcagcaccaggtgtgcccctactacctgagccaggaaatcgcg
cgctgggccgatgtggtggtgggcgactacaactattacttcgacctgggcggcctgctg
cacggcctgacccaggccaaccagtggcgcaccgcattgctggtggacgaggcgcacaac
ctggtcgagcgcggccgcaagatgtacacagccgagctgcgcccggctgccctggccgag
gcccgccgcagcgccaccgctgcgcgccatgccccggtgaagaaggcgctggacaaggtg
cgccgctgctgggtggcactcgacaaggcgcaggccagcgcctacgcggtccacgacacc
ttccccgacaagctgctggccgcgctgcagcaatgcggcagcacgctgaccgagcacttc
accgaccaccccaccgagcccgacgcggcgctgcaggcgttctacttcgacgccctgcac
ctggtgcacatggccgagctgctgggcgcgcattcgatggtggacatcacccaacccacc
cattcctacaacggcaaagccaccacgccgggcgattccaccctgtgcatccgcaacgtg
gtgcccgcgccgtttctgcagccgcggctggcggccgcgcacaccagcacgctgttctcg
gccacgttgcagcccgcgcgctactacgcagacctgctggggctgccggcagaccattgg
tgggttgacgtcgaatcgccctttcacgccgcgcagctgcaggtgcaggtggcacgccac
atctccacgcgcttcccgcaccgcgccgcatcgctgcatcccatcgtggcgctgatggcc
cggcagttccaggcgcgccccggcaactacctggcatttttcagcagctacgactacctg
cagcaggtggcggcgctgtttgcgcagcgtcaccccgaggtgccccactggtgccagaca
cgccgcatgctggaggccgagcagcgcgcgtttctggaccgcttcacccccaccagccag
ggcattgcgtttgccgtgctgggcggcgcatttgccgagggcatcgacctgcccggaaag
cggctcgtcggcgcctttctggccacgctggggctgccgcagatcaacccggtcaacgaa
cagattcgcgagcgcatgcacgccctgtttggcgcgggctatgactacacctacctgtat
cccggcctgcaaaaggtggtgcaggcggcggggcgcgtgatacgcacgcccagcgacgaa
ggcgtggtgcacctgatggacgaccggttcgggcacgcgcaggtgcgggcgctgctgccg
cactggtgggggctccacccacgggcgggcacgccggtcccgcgccaggacctggacggg
cacgcgccattacccctgccgcgccccgcctcgaaaatatcaatttga
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