Acidovorax carolinensis NA3: CBP34_13985
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Entry
CBP34_13985 CDS
T04997
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
acin
Acidovorax carolinensis NA3
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
acin02044
]
CBP34_13985
02035 Bacterial motility proteins [BR:
acin02035
]
CBP34_13985
Secretion system [BR:
acin02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CBP34_13985
Bacterial motility proteins [BR:
acin02035
]
Pilus system
Pilus assembly proteins
CBP34_13985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ART52546
UniProt:
A0A240U3Z0
LinkDB
All DBs
Position
1:3002952..3006623
Genome browser
AA seq
1223 aa
AA seq
DB search
MPRTNRIPFQKNLLAIAMGAALSPAWALELVQEPPLPTSKSAFVAPNVIISVDDSGSMNF
GVKTDTTGSTATGPGYTEPDSTGKWMNDARRIKVLQYALKKVFNDKGLIPENKLRIAWQS
MNNGTQKNVNAAGMVTNSMRPIDAVVGTSKVHRDNFLAFVDGLAPGSGTPLHRLPSQADA
YMRRTLNSSSPWSTDPGGTGSKATEYLGCRRNYHILMTDGRWNGAVSGGTQDGTNWPSLG
DRLAYSTTSDQTKIYYDNYSDTISDWAFKSWMDPLQTASSLKDSDKIKPSKIYDEAPATE
FFTKTINKFKIVTVSGSNSAKRKTACEAISGEYLSGTSDNCKVPDGTETKSVDLQKYWNP
KYNPATWPHMVTYTIGFSDDATTWPGASDIIGPSNKVPFGYDNSFVDLVTGLQTWPAMDT
EDKRALDLWHSAINGRGRFYSVSEAEDLAKAFTEIIGKINEESAPLPDEIAGGGSTSGYN
VSQSNAGIFASIYSPKRGWSGSITATRALEPEEYACPTKADPSLKCVRFPDTIAGWQGKS
TADRLDELTSVDNRLVLSWSDDTSKGIPFKWDSTSGIGYSTAQKLALLNVTSGDTSLDPL
KTQGINIVNYIRGDRTLEGTTTAKPLRVRYSRQGDVVNSEIWYTGRPSGNHAMGYSTFVT
AQKNRTPILYVGGNDGMLHGFSATDGKELLAYVPRGVVSGLKALTDKDYQHRYYVDGSPM
TGDIKDGTNWKTLLVGTLGAGGKGYFVLNVTDPAGFGTAAAADLVVLDRTRAKDEAAPNC
SALSGAAQIACNTAVDENKDIGNIVAQPGRNPANLQEATQITRMNNGRWAVVMGNGYNST
NQRPVLLVQYLDGTDKKLMRIQATTDAMGSGNAKDNGLASPALVDLDGDGKTDVVYAGDN
LGNVWKFDLTSTDETQWAVAFGNNKPLFTTLGPVALGGTRDKVQPITAPPIVRPNDRTMT
VGTGASAKTIPLGGMMVAFGTGRNLTANDRRTDITQNVQTLYSVLDNTRYRMRSDKTALE
VHPGTGDCTSAPATCVPTPAPVGTLASDGKPLAKQSITTVSGDFATVTATQELKKETWKD
YKGWYLDLPFTGERLLKPMQFFDGSNILAVYTESPSGTKNSESDNINESCVPVKVDTSAG
SQFRTLVNIMDGKLPTVQLVDYDNNGIYNIDDKKVARAPVKTGTPVLITKRDRIVDLTGG
GGARDTLNRMPEQSMRPSWRQLR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcaccaaccgcatccccttccagaagaacctgctggctattgccatgggcgcc
gcactgtcccccgcctgggcgctggagctggtacaggagccaccactgcccacatccaaa
tcggcttttgtggcgcccaatgtgattatctcggtcgacgattcagggagtatgaatttc
ggcgttaaaaccgacaccactggttcaaccgctaccggcccaggctatacagaacctgat
agcaccggaaaatggatgaatgacgcccggcgcatcaaggttctgcaatatgcattgaaa
aaagttttcaatgacaaaggccttataccagagaataaattgcggattgcctggcaatcc
atgaacaacggcacccaaaaaaatgtcaacgcggccggtatggtcaccaactccatgcgc
cccattgacgcggtcgtaggcaccagcaaggtacaccgcgacaattttctggctttcgtc
gatggtttggcgccaggcagtggcaccccattgcaccggcttcccagccaagcagatgcc
tacatgcgccgcaccctcaacagcagcagcccatggtccacggaccccggtggaaccggc
agcaaggccaccgaatacctggggtgccgccgcaattaccacatcctgatgaccgatggc
cgctggaacggtgcggtgtccgggggcacccaggatggtacgaactggccctctctgggc
gaccggctggcgtacagcaccacatccgaccagaccaaaatctattacgacaactattcc
gatacgatttctgattgggcattcaaaagctggatggacccattgcagactgcatcgagt
ctgaaagattcagacaaaattaaaccctcgaaaatttatgatgaagccccagccacggaa
ttttttaccaaaaccataaacaaattcaaaattgtgacagtctccgggagtaacagcgcc
aagagaaaaaccgcatgcgaggctatttccggagaatatctcagcggcacaagtgataat
tgtaaagtgccagatggcaccgaaaccaaatcagtagatttacagaaatattggaatcca
aaatataatcccgcaacgtggccgcatatggttacgtacacgattggattcagcgatgac
gccacaacctggccgggcgccagcgacatcattgggccatcgaacaaagtcccttttggc
tacgacaatagctttgtcgatcttgtaaccggcctccaaacctggccggcgatggatacc
gaagacaagcgtgcactcgacttatggcattccgctatcaacgggcgtggtcgtttttat
tcggtatcggaggccgaagacctcgccaaagcctttaccgaaatcatcggcaaaatcaac
gaagaaagcgcccccctgcccgacgaaattgccggtggtggcagcaccagcggctacaac
gtttcgcaaagcaatgcgggcatatttgcctcaatctacagccccaaaagaggctggagt
ggttcgatcaccgccacaagagcccttgaaccggaagaatatgcgtgcccaacaaaagct
gaccccagccttaagtgcgtccgctttcctgacaccattgccggctggcaaggcaagtcc
acagcagaccggctggacgagctgacctcggtggacaaccggctggtgctgagctggagt
gacgacaccagcaaaggcattccgttcaaatgggacagcacatccggcattggctacagc
actgcccagaagctggcgttgcttaatgtgacttcgggcgacacgagcctggacccgctg
aagacccagggaatcaacatcgtcaactacatccgtggcgaccgcacgttggaaggcacc
accacagccaaaccgctgcgcgtgcgctacagccggcagggcgacgtggtcaactctgaa
atctggtacaccggccgcccgtctggcaaccatgcgatgggttattcgaccttcgtgacg
gcccagaaaaaccgcacacccattttgtatgtaggcggcaacgacggcatgctgcacggg
ttctcagcgaccgacggcaaggagttgttggcctatgtgccgcgtggcgtggtcagcggg
ctgaaggccctgaccgacaaggactaccagcaccgctactacgttgatggatcgcccatg
accggcgacatcaaggacggcaccaactggaagaccctgctggtgggcacattgggtgct
ggcggcaaaggctactttgtgctgaacgtgaccgaccccgctggctttggcaccgccgct
gccgccgatctggtggtgcttgaccgcacccgcgccaaagacgaggctgcccccaattgc
agcgcgctttcgggcgcggcacaaatcgcgtgcaacactgccgtggatgaaaacaaagac
atcggcaacatcgttgcccagccggggcgcaaccccgccaacctacaagaggccacgcag
atcacgcgcatgaacaacggccgctgggcggtggtgatgggcaatggctacaacagcacc
aaccaacgcccggtgctgctggtgcaatacctcgatggcactgacaaaaagctcatgcgc
atccaggccaccaccgatgccatgggcagcggcaacgccaaggacaacggactggcatcg
cccgcgctggtggacctggatggtgatggcaagactgacgtggtctatgcaggcgacaac
ctgggcaacgtctggaagttcgacctgaccagcaccgatgagacccaatgggcggtggcc
ttcggcaacaacaagccactatttaccacgctcggccctgttgctctgggcggcacgcgc
gacaaggtgcaaccgatcacggccccgcccatcgtgcgccccaacgaccgcacgatgacc
gtgggcacgggagccagtgcaaaaaccattcccttgggtggcatgatggttgcctttggc
acgggccgcaacctcactgccaacgaccgccgcaccgacatcacacaaaacgtgcaaacg
ctgtattcggtgctggacaacacgcgctatcgcatgaggtccgacaagactgcactcgaa
gttcacccaggcacaggcgattgcaccagcgcgcccgccacctgcgtgcccacgcccgcg
cccgtgggcaccctggccagcgacggcaagcctttggccaagcaaagcatcaccaccgta
tctggtgacttcgccaccgtgacagcgacccaagagttgaagaaagaaacctggaaggac
tacaaggggtggtatctggacttgccgtttacgggcgagcgcctgctaaaacccatgcaa
ttctttgatggcagcaatattctcgcggtctataccgaatcgccctcgggcaccaagaac
agcgagagcgacaacatcaacgaaagctgcgtgccagtgaaggtggacaccagtgccggc
agccagttccgcacgctggtcaacatcatggatggcaagctccccacggtccagctggtg
gactacgacaacaatggcatctacaacatcgacgacaagaaagtagcccgtgcgccggtg
aagaccggtaccccggtactgatcacgaaacgcgatcgcatcgtggatctgaccggaggt
ggcggtgcccgggacaccctgaaccgcatgcccgagcaatccatgcgccccagctggcgt
caactgcgctag
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