Acidovorax carolinensis NA3: CBP34_14630
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Entry
CBP34_14630 CDS
T04997
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acin
Acidovorax carolinensis NA3
Pathway
acin03420
Nucleotide excision repair
acin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBP34_14630
03430 Mismatch repair
CBP34_14630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acin03400
]
CBP34_14630
Enzymes [BR:
acin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBP34_14630
DNA repair and recombination proteins [BR:
acin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBP34_14630
MMR (mismatch excision repair)
Other MMR factors
CBP34_14630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ART52651
UniProt:
A0A240U5I4
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All DBs
Position
1:complement(3149683..3152136)
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AA seq
817 aa
AA seq
DB search
MFPQDPFSGAPEALVPPHAGAPSAASPLLANLNDEQLAAVTLPAGHALILAGAGSGKTRV
LTTRIAWLLQNGYATPGGILAVTFTNKAAKEMVARLSAMLPVNVRGMWIGTFHGLCNRLL
RAHHKAAGLSQSFQILDTQDQLSAIKRLCKQHNVDDERFPPKQLAYFIANCKEEGMRPGD
VPTHDGDARKKVEIYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIREHYQRRFAHILV
DEFQDTNKLQYAWLKQLAGNEVNGRFEARGSVVAVGDDDQSIYAFRGARVGNMADFVREF
DVQRQIKLEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGAGEPVRVYEASSDLAEAQ
WMVDEIKQLVRNDGFERKEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKH
ALAYLRLLENPHDDTSFSRVVNFPPRGIGARSIEVLQDAARAAGCSLHDAVSAVPGKAGA
NLGAFVAMVDVLREQTQGLNLRGIIEQMLQSSGLVEHFRTEKEGADRIENLQELVNAAES
FVTQEGFGRDAVALPLDEHGTPLTQSAVSQGIDPNAPVLNEPLKPAVPGIVDIDTGETLS
PLAAFLSHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDGVFIGGLEEGLFPHENSASDR
DGLEEERRLMYVAITRARKRLYLSHSQTRMLHGQTRYNIKSRFFDELPEGALKWITPKQQ
GFGSYAPNSGAFSAYSSSARGQFGFKSETFASPPVPVQKTAPSHGLRAGINVFHTKFGEG
KVLAIEGTGDDARAQVNFPRHGTKWLALSVAKLTVVE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacaagacccgttttcgggtgcgccagaagccctggtgcccccacacgctggt
gcgccctcggctgcatcgcccctcctggccaacctgaacgacgagcaactggccgccgtc
acgctgcccgcaggccacgcgctcatcctggcgggggccggctcgggcaagacgcgcgtg
ctcaccacccgcatcgcttggttgctgcaaaacggctacgccacgcccggcggcattctg
gccgtcacctttaccaacaaggccgccaaggaaatggttgcgcgcctgtcggccatgctg
ccggtgaacgtgcgtggcatgtggattggcaccttccacggcctgtgcaaccggctcttg
cgcgcgcaccacaaggcggcggggctgtcgcagtcgtttcaaattctcgacacgcaagac
cagctctcggccatcaagcgcctgtgcaagcagcacaacgtggatgacgagcgttttccg
cccaagcaactggcctacttcattgccaactgcaaggaagaaggcatgcgccccggcgat
gtgcccacgcacgacggcgatgcgcgcaagaaggtcgagatctaccagctgtatgaagag
caatgtcagcgcgaaggcgtggtggattttggcgagctgatgctgcgcagctacgagctg
ctgcgtgacaacgatcccattcgcgagcattaccagcgccgctttgcacacattctggtg
gacgagttccaggacaccaacaagctgcaatacgcctggctcaagcagctggcaggcaac
gaggtgaatgggcgctttgaagcacgcggcagtgtggttgccgtgggcgatgatgaccag
agcatctatgcctttcgcggcgcgcgcgtgggcaacatggccgactttgtgcgcgagttt
gatgtgcagcgccagatcaagctggagcagaactaccgcagctacagcaacatcctcgac
tcggccaacgccctcatcagccacaacagccgccgcctgggcaagaacctgcgcaccacg
cagggcgcgggcgaaccagttcgcgtgtacgaggccagctccgacctggccgaagcgcag
tggatggtcgacgagatcaagcagctggtgcgcaacgacggttttgagcgcaaggaaatc
gccgtcctctaccgcagcaatgcgcaaagccgggtgatcgaatcggcgctgttcaatgcc
agcgtgccctaccgcgtgtatggcggcctgcgctttttcgagcgcgccgaaatcaagcac
gcgctggcctacctgcgcctgctggagaacccgcacgacgacaccagtttcagccgcgtg
gtcaactttccgccacgcggcatcggcgcgcgcagcatcgaggtgttgcaagacgccgcc
cgcgccgccggctgctcgctgcacgacgccgtgagcgccgtgcccggcaaggcgggcgcc
aacctgggcgcgtttgtcgccatggtcgatgtgctgcgtgagcagacgcagggcctgaac
ctgcgcggcatcatcgagcagatgctgcaatcctcggggctggtggagcactttcgcact
gaaaaggaaggcgccgaccgcatcgagaacttgcaggaactggtgaacgcggccgaaagc
tttgtcacgcaagaaggctttggccgcgacgccgtggcgctgccactcgatgagcatggc
acaccgctcacgcaaagcgcggtcagccagggcatcgaccccaatgcgccggtgcttaat
gagcccttgaagcccgccgtgcccggcattgtggacatcgacaccggcgaaaccctgtca
ccgctggctgccttcctctcccatgccgcactcgaagccggcgacaaccaggcccaggcc
gggcaagacgccgtgcaactgatgaccgtgcacgccagcaaaggcctggagtttgacggc
gtgttcatcggtggcctggaagagggcctgttcccccacgaaaactcggccagcgaccgc
gatggcctggaggaagaacgccgcctgatgtacgtggccatcacccgcgcgcgcaagcgc
ctgtatctgagccactcgcaaacgcgcatgctgcatggccagacgcgctacaacatcaag
agccggttttttgacgagctgcccgaaggcgcactcaagtggatcacgcccaaacagcag
ggtttcggttcgtatgctcctaattcaggagcttttagcgcttactcatcaagcgcccga
ggccaatttggtttcaaatccgagacctttgccagcccgcccgtgccggtgcagaagacc
gcgccctcgcacggtctgcgcgcaggtatcaacgtgttccacaccaagtttggcgaaggc
aaagtgctggccatcgaaggcaccggcgacgatgcgcgcgcacaggtcaactttccgcgc
cacggcaccaagtggctggcgctgagcgtggccaagctgacggtggtggagtga
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