Acidovorax sp. 1608163: EAG14_00440
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Entry
EAG14_00440 CDS
T05680
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
acio
Acidovorax sp. 1608163
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acio03000
]
EAG14_00440
Transcription factors [BR:
acio03000
]
Prokaryotic type
Helix-turn-helix
Other families
EAG14_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
GAF
AAA_lid_14
AAA_5
HTH_7
HTH_29
HTH_30
HTH_28
HTH_23
AAA_16
AAA_2
HTH_22
UBA_HOIP
Mg_chelatase
Phage_CP76
PAS
HTH_17
AAA
HTH_20
HTH_Tnp_ISL3
HTH_1
nSTAND6
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
AYM94836
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Position
97186..99156
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AA seq
656 aa
AA seq
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MPLLALQQARRHLLEHGHCPSGVVDERLARSWRRSVAAGLAPTGRAMADLPSPGDLRQAM
AGNHSLLTHSRPIMEYLFDQVRHSHSVVVLADRAGMLMHTLGSPGFIDKAERVALTCGAS
WHEAHRGTNAIGTALAEGNAVEVHGGEHFLERNSFLTCAASPILSATGELLGILDISGDH
RNGHAHTLGLVSTAARMIENRLLVATCTRNIRLHLHREPEGIGSVAEGIVAVSADGWIVG
ANRVALAQLGLHTGDLGATLLERVADVRLDDLLSHHHRRPQQPQALRLRGGALLYAQVQL
DAAAWPAVHKPSASVHTAAVPDDALARLDTGDARWRAAADKARRVVGKPIPVLIQGESGV
GKEVFARALHASGPRSSGPFVAINCAAIPEHLIESELFGHVAGAFTGARKEGSLGRLRQA
HGGTLFLDEIGDMPLALQTRLLRVLQDRSVTPVGAGQAVPVDFCLISATHCQLLQAAEQG
RFRHDLYYRLNGLTVQLPALRERSDFDALTTHLLAELAAEQGLPHPVHLAPALLQRLAAH
PWPGNLRQYASVLRTACAMLAEGEDQLGWEHLGDDIVQALETVAAPVSAAAAPQAPYPPL
QRHVHGHAPVLLSLQQLSSAAIDQALQSARGNVSQAARQLGISRQTLYRKLAARVH
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atccccctgctggccttgcaacaggcccggcgacatttgctggaacacggccattgcccc
agtggcgtagtggacgagcggctggcccgctcctggcggcgcagcgtggccgcaggcctg
gcccccaccgggcgcgccatggcagacctgcccagccccggtgacctgcgccaggccatg
gcgggcaaccacagcctgctcacccactcgcgccccatcatggaatacctgttcgaccag
gtgcgccacagccacagcgtggtggtgctggccgaccgtgcgggcatgctcatgcacacg
ctgggcagccccggcttcatcgacaaggccgagcgcgtggcgctgacctgcggcgcctcg
tggcacgaggcccaccggggcaccaacgccatcggcaccgcgctggccgagggcaacgcg
gtggaggtgcatggcggcgagcattttctggagcgcaacagctttctcacctgcgcggcc
tcgcccatcctctcggccacgggcgagctgctgggcatcctcgacatctcgggcgaccac
cgcaatggccacgcccacaccctgggcctggtcagcaccgccgcccgcatgatcgaaaac
cgcctgctggtggccacctgcacgcgcaacatccgcctgcacctgcaccgcgagcccgaa
ggcattggcagcgtggccgaaggcatcgttgccgtgtcggccgacggctggatcgtgggc
gccaaccgcgtggccctggcccagctgggcttgcacacgggcgacctgggcgccaccttg
ctggagcgggtggccgacgtgcggctggatgacctgctctcgcaccaccaccgccgcccc
cagcagccccaggcgctgcgcctgcgcggcggggccttgctgtatgcccaggtgcaactg
gacgccgctgcctggcctgccgtgcacaagcccagcgccagcgtccacacggcggccgtg
ccggacgatgccctggcccggctcgacacgggcgacgcccgctggcgcgccgctgccgac
aaggcccgccgcgtggtgggcaagcccatcccggtgctcatccagggcgaatcgggcgtg
ggcaaggaagtgtttgcccgcgccctgcacgccagcggcccgcgcagcagcggccccttt
gtggccatcaactgtgcggccatccccgagcacctgatcgaatccgagctgtttggccat
gtggccggtgccttcaccggcgcccgcaaagagggcagcctgggccgcctgcgccaggcc
cacggcggcacgctgtttctcgatgaaatcggcgacatgcccctggccctgcaaacccgc
ctgctgcgcgtgctgcaagaccgcagcgtgacgcctgtgggcgcaggccaggccgtgccg
gtggacttttgcctcatcagcgccacgcactgccagctgctgcaggcggccgagcagggg
cgttttcggcacgatttgtactaccgcttgaacggcctgacggtgcaattgcccgccctg
cgcgagcgcagcgactttgacgccctcaccacccacttgctggccgagctggccgctgag
cagggcctgccccaccccgtgcacctggcccccgccttgctgcagcgccttgccgcccac
ccctggcccggcaacctgcgccaatacgccagcgtgctgcgcaccgcctgcgccatgctg
gccgagggcgaagaccagctgggctgggagcacctgggtgacgacatcgtgcaggcgctg
gaaacggtggctgcacccgtgtctgcagcggcggctccccaagctccatacccgcctctg
caaaggcatgtgcacgggcacgccccagtgctgctcagcctgcagcaactctccagcgcc
gccatcgaccaggccctgcaaagcgcacgcggcaacgtgtcacaggccgcccgccagctc
ggcatcagccgccaaacgctgtaccgcaagctggcagcgcgcgtgcattga
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