Acidovorax sp. 1608163: EAG14_04370
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Entry
EAG14_04370 CDS
T05680
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acio
Acidovorax sp. 1608163
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acio03016
]
EAG14_04370
Enzymes [BR:
acio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EAG14_04370
Transfer RNA biogenesis [BR:
acio03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAG14_04370
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
ProQ_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AYM95467
LinkDB
All DBs
Position
complement(973846..975927)
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AA seq
693 aa
AA seq
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MHALFEEAGKFMAGRILSEAESSAQVELDSGKRVKVKAANILLRFEKPAPSELIAQAQAV
AESIELDLAWEFAPEDDFGFADLARDYFSENATLVQQAGALFRLYDAPHYFRRAGKGRFK
KASAEILQQALAAIEKKKALLAQIDEWAAALGRGECPQPIREQLYKILFKPDKNAPEYKA
VVEASRATHTAPLDLLQKAGAIDSAYQFHWKRFLFENFPKGTGFPAVTAPAIADELPLST
AQAYSIDDSQTTEIDDALSVQGLGTGTVVLGIHIAAPGLAIQPGSAIDQLGRARLSTVYM
PGYKITMLPDDVVQTYTLDEGRANPAVSLYVTIDEATLEFKGSETKLERVHVAANLRHDQ
LDSVVTEEWLSNPAFEHQNDPQRLSDLRPQLSFLHRLAKELKARREVVRGKPENFNRPDY
NFRLVGNNGAEPTGHEQVQISVRQRGAPLDLIVAEAMIVANSTWGSWMAELGVPGIYRSQ
ASMAPGVKVRMGTKALPHAGIGVKAYSWATSPLRRYTDLVNQWQIIACARHGATAALAAP
FKPKDADLFSIISSFDGAYSAYNGYQAGMERFWTLKYVEQNGITELNATVFKEGPGGSFL
VRADDIPLVFPVLGAQNLPRGARLKVKLGEVDEITLDLHGTVLERLDDPADASDDAPLED
DGDDEAVAGPIAIAVDVNEADTPTNANADHPTP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcactgtttgaagaagccggcaaattcatggccggacgtatcctgtccgaggcg
gaaagctccgcccaagtcgagctcgattcgggcaagcgggtcaaggtcaaggccgccaac
atccttttgcgatttgaaaaacccgcgccgtccgagctgatcgcccaggcgcaagccgtg
gccgagagcattgagctggacttggcctgggaattcgcgcccgaggacgactttggcttt
gccgacctggcgcgcgactatttttccgagaacgccaccctggtccagcaggcaggcgcg
ctgttccgcttgtacgacgcgccccactacttccgccgtgcgggcaagggccggttcaag
aaggcctcggccgagatcctgcagcaggcattggctgccatcgagaagaaaaaagccctc
ctggcgcaaatcgacgagtgggccgcggccctgggccggggcgaatgcccacagcccatc
cgcgagcagctctacaaaatcctgttcaagcccgacaagaacgcgcccgagtacaaggcc
gtggtcgaagccagccgcgccacgcacaccgcaccgctcgatctgctgcaaaaggctggc
gctatcgactccgcctaccagttccactggaagcgctttttgttcgagaacttccccaag
ggcacgggctttccggccgtcacggcaccggccattgccgacgaactgccgctgtccacc
gcgcaggcgtattccatcgacgactcgcagaccaccgaaatcgacgatgcgctgtcggta
caaggcctgggcaccggcaccgtggtgctgggcatccacatcgctgcgcccggcctggcc
atccagccgggcagcgccatcgaccagttgggccgtgcgcgcctgtccacggtgtacatg
ccgggctacaagatcaccatgctgcccgacgacgtggtgcagacctacacgctggacgaa
ggccgcgcgaacccggccgtgtcgctgtacgtcaccatcgacgaggccacgctggagttc
aagggctctgagaccaagctcgagcgcgtgcacgtggccgccaacctgcgccacgaccag
ctcgacagcgtggtgaccgaagaatggctcagtaacccagcgtttgagcaccaaaacgac
ccgcagcgcttgtctgacctgcgcccgcagctatcctttttgcaccgactggccaaagag
ctcaaggcccgtcgcgaagtggtacgcggcaagcccgagaacttcaaccggccggactac
aacttccgtctggtgggcaacaacggcgccgagcccacgggccacgagcaagtgcaaatc
agcgtgcgccagcgcggcgcgccgctcgacctgatcgtggccgaggccatgatcgtggcc
aacagcacctggggcagttggatggccgagctgggtgtgcccggcatctaccgcagccag
gccagcatggcgccgggcgtgaaggtgcgcatgggcaccaaagcgctgccgcacgcgggc
attggcgtcaaagcctattcgtgggccacgtcgcccctgcgccgctacaccgacctggtc
aaccagtggcaaatcattgcctgcgcgcgccacggcgccacggccgcgctggcagcgccg
ttcaagcccaaggatgcggacctgttctccatcatcagcagctttgacggcgcctacagc
gcctacaacggctaccaggcaggcatggaacgcttctggacgctcaaatacgtcgagcaa
aacggcatcaccgagctgaacgccaccgtcttcaaggaaggccccggcggcagctttttg
gtgcgggctgacgacattccgctggtcttccccgtgctgggtgcgcaaaacctgccgcgc
ggcgcgcgcctcaaagtcaagctgggcgaggtggacgaaatcacgctggacctgcacggc
accgtgctcgagcggctggacgaccccgccgatgccagcgatgatgcgcccctggaagac
gacggcgacgacgaagccgtggctggccccatcgccattgccgtggacgtcaatgaggcc
gacacccccaccaacgccaacgctgaccacccaacgccgtga
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