Acidovorax sp. 1608163: EAG14_04945
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Entry
EAG14_04945 CDS
T05680
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acio
Acidovorax sp. 1608163
Pathway
acio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAG14_04945 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acio03019
]
EAG14_04945 (pnp)
03016 Transfer RNA biogenesis [BR:
acio03016
]
EAG14_04945 (pnp)
Enzymes [BR:
acio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EAG14_04945 (pnp)
Messenger RNA biogenesis [BR:
acio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EAG14_04945 (pnp)
Transfer RNA biogenesis [BR:
acio03016
]
Prokaryotic type
tRNA degradation factors
EAG14_04945 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
S1_2
DUF5813
KH_KhpA-B
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AYM95562
LinkDB
All DBs
Position
1094186..1096405
Genome browser
AA seq
739 aa
AA seq
DB search
MSIFNKITKTFQWGDKTVIMETGEIARQASGAVLVNIDDTVVLATVVASKGAKPGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFFNEVHVVIHTV
SLNPEVDADIAALIATSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKNSQMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHEQGNVAINAIHELVRDAGKPVWQWEAPAK
DEALIAKVVALADDKLRAAYQIRNKQARTQACREAYAAVMAALKADGVEFDAVKVEGMLF
DIEAGIVRSQILAGEPRIDGRDTRTVRPIEIRGSVLPRAHGSSLFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMMHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDANRFAVL
TDILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARIHILGKMQ
EAMGEAKTEVSNFAPKLYTMKINPEKIRDVIGKGGSVIRALTEETGCQINIDEDGTITIA
ATDAAKADEAKKRIEQITAEVEIGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVGDYLTEGQIVKVKVMETDEKGRIKLSMKVLADRPAGGSDRPAPAERGDREPRRDHG
RDGGRQPSEQQQQQEQQQQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaaatcaccaaaaccttccaatggggtgacaagaccgtcatcatg
gaaacgggcgagatcgcccgccaagcctccggtgcggtgctggtgaacattgacgacacc
gtggtgctggccaccgtggtggcttccaagggggctaagcctggccaggacttcttcccc
ctgacggtggactacatcgagaagacgtacgcggccggcaagatcccaggcagcttcttc
aagcgcgaagccaagcccagcgagcacgaaaccctgaccagccgcctgatcgaccgtccg
attcgtccgctgttccctgaaggtttcttcaacgaagtgcatgtggtgatccacacggtg
tcgctgaaccctgaagtggatgctgacatcgcagccctgattgctaccagcgcggccctg
gccatctctggcatcccgttcaacggccctatcggtgccgcgcgcgtgggctatatcaat
ggcgaatacgtgctcaaccccggccagactgcgcgcaagaactcgcagatggatctggtg
gtggcgggcaccgaagccgcagtgctgatggtcgaatccgaagcccagcaactgtctgaa
gaaatcatgctgggtgctgtggtgttcggtcacgagcaaggcaatgtggccatcaacgcc
atccacgaactggtgcgtgatgcgggcaagcccgtgtggcagtgggaagcgcctgccaag
gacgaggccctgatcgccaaggtggtggctctggccgacgataagctgcgcgccgcctac
cagatccgcaacaagcaagcccgtacccaagcctgccgtgaagcctatgccgccgtgatg
gctgcgctgaaggccgatggcgttgaattcgacgcggtcaaggtcgaaggcatgctgttc
gatattgaagccggtatcgtgcgcagccagattctggcgggcgaaccccgtattgatggc
cgtgatacgcgcaccgtgcgccccatcgaaatccgcggcagcgtgctgccccgcgcccac
ggctcgtcgctgttcacgcgtggcgaaacccaggcgctggttgtgaccacgctgggtacc
gagcgcgatgcacagcgcatcgatgcactggctggcgagtacgaagatcgcttcatgatg
cactacaacatgcctcccttcgccactggcgaagtgggtcgcatgggctcgaccaagcgc
cgcgaaatcggccacggccgtctggcaaagcgtgctctggtggctgtgctgccgaccaag
gaagagtttccctacaccatgcgtgtggtgtcggaaatcaccgagtccaatggctcttcg
tcgatggcttcggtctgcggtggctgcctgtcgctgatggatgctggcgtgcccatgaag
gcgcacgtggcgggtatcgccatgggcttgatcaaggatgccaaccgctttgccgtgctg
accgacatcctgggcgatgaagatcacttgggcgatatggacttcaaggtggcaggtacc
acagccggtatcactgcgctgcagatggacatcaagatccaaggcatcaccaaggaaatc
atgcaagtcgccctggcccaggccaaggaagcgcgcattcacatcctgggtaagatgcaa
gaggccatgggcgaagccaagaccgaagtgtcgaactttgcgcccaagctctacacgatg
aagatcaaccccgagaagatccgcgacgtgatcggcaagggtggttcggtgatccgtgcg
ctgaccgaagaaaccggctgccagatcaacatcgacgaagacggcaccatcaccattgcc
gccacggatgctgccaaggcggatgaggccaagaagcgcattgagcagatcacggctgaa
gttgaaatcggcaagatctacgaaggcccagtgaccaagattctggacttcggtgcgttg
atcaatctgctgcctggcaaggacggtctgttgcacatcagccaaatcgcccacgagcgc
gttgagcgcgtgggtgactacctgaccgaaggccagatcgtcaaggtcaaggtcatggag
actgatgagaagggtcgcatcaagctgtcgatgaaggtgttggcagaccgccctgccggt
ggcagtgaccgccctgcgcccgccgagcgcggtgaccgtgagccacgccgtgaccacggt
cgtgatggtggtcgccagccctccgagcagcaacaacagcaagaacagcaacagcagtga
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