Acidovorax sp. 1608163: EAG14_16110
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Entry
EAG14_16110 CDS
T05680
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acio
Acidovorax sp. 1608163
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acio03021
]
EAG14_16110 (rpoH)
Transcription machinery [BR:
acio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAG14_16110 (rpoH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF2390
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AYM97325
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Position
3625615..3626556
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AA seq
313 aa
AA seq
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MTLSSGTAITAVTPTSPWALVPALGNLDAYISAVNRLPLLTQEEEQTYARQLKENNDVDA
AGRLVMSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKADASAADAATHRDTLSDHEIDV
VAAQLNVKREEVIEMETRMSGGDVLLDPTPSDDSEQAFGPIAYLADASHEPTAMIESRQR
DVLASDGIANALASLDERSRRIVEERWLKVNDDGSGGMTLHELAAVYGVSAERIRQIEVA
AMKKMKKALTEPA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcatctggaaccgcaatcactgctgtgacacccaccagcccctgggcgcta
gtcccggccctgggcaacttggacgcctacatttcggcggtcaaccgcctgcccctgctg
acgcaggaagaagagcagacttacgcccgccaactcaaagaaaacaacgatgtggacgct
gcgggccgcttggtgatgtcgcacctgcgcttggtggtttccatttcacgccagtacctg
gggtacgggttgccccatggcgatctgatccaggaaggcaatgtcggcctgatgaaggcc
gtcaagcgttttgaccctgaccagggcgttcggctggtgagctacgccatgcactggatc
aaggccgagatccatgaatacattctgaaaaactggcgcatggtcaaggtggcgaccacc
aaggcccagcgcaagctgtttttcaatctgcgctcgatgaaacagggcttcaaggccgat
gccagcgcagctgatgctgccacgcaccgcgacacgctgtctgaccacgaaatcgatgta
gtggcagcacagctgaacgtgaagcgcgaagaggtcattgagatggaaacgcgcatgtcg
ggtggcgatgtgctgctggaccccaccccttcggacgacagcgagcaagcctttggcccg
attgcttacttggccgatgcatcgcacgagcccacggccatgattgagtcgcgccaacgc
gatgtgctggcgtctgacggtattgccaatgcgctggccagcctggacgagcgcagccgc
cgtattgtggaagagcgctggctgaaggtgaacgacgatggctctggcggcatgacgctg
cacgagctggcggcggtttacggcgtgagtgctgaacgcatccggcaaattgaagtggct
gcgatgaagaaaatgaagaaggctttgacggaacccgcctaa
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