Acidovorax sp. 1608163: EAG14_18315
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Entry
EAG14_18315 CDS
T05680
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acio
Acidovorax sp. 1608163
Brite
KEGG Orthology (KO) [BR:
acio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acio03016
]
EAG14_18315
Enzymes [BR:
acio01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EAG14_18315
Transfer RNA biogenesis [BR:
acio03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EAG14_18315
Prokaryotic type
tRNA splicing ligases
EAG14_18315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AYM97695
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All DBs
Position
4125463..4126686
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AA seq
407 aa
AA seq
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MTNNYEQLEIPNGVPVKMWTNGVPVEEDAKNQLRNIARLPIVFKHVAVMPDVHLGIGATI
GSVVPTLKAIIPAAVGVDLGCGMMACKTTLTASDLPDNLSGVRAAIERAVPVGMTPKRFG
RDKGSWDTPPSETDRAWAGLVDEFEEICEAHPRIKNTNNYKHLGTLGTGNHFIEICLDEH
QSVWVMLHSGSRGVGNAIGTHFIELAKKDAEMNQRNLPDKDLAYFEEGAQYFGDYVKAVG
WAQKFAAANREVMMGRVIAALRKVITKPFETHIEAVNCHHNYVQRETHFGQDVFVTRKGA
VSAEQGKLGIIPGSMGAKSFIVRGKGNPESFNSCSHGAGRTMSRTKAKKLFTVEDQIKAT
EGVECRKDADVIDEIPMAYKDIDAVMAAQEDLVEVVYTLKQVVCVKG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataactacgaacaactcgaaatcccgaacggtgtgcccgtgaagatgtggacg
aacggcgtgcctgtggaggaagacgcgaagaaccagctgcgcaacatcgcgcgcctgccc
atcgtgttcaagcacgtggcggtgatgcccgacgtgcacctgggaatcggcgcgaccatc
ggctcggtggtgcccaccctcaaggccatcatccctgctgcggtgggggtagacctgggg
tgcggaatgatggcgtgcaagaccacgctgacggccagcgacctgcccgacaacctctcc
ggcgtgcgcgctgccatcgagcgtgccgtgccggtggggatgacgcccaagcgctttggc
cgcgataagggaagctgggatacgccgccctccgaaaccgaccgcgcctgggcgggtctg
gtggatgagttcgaggaaatttgcgaagcgcacccgcgcatcaagaacaccaacaactac
aagcacctgggaacgctgggaacgggtaaccacttcatcgagatctgcctggacgaacac
cagtctgtgtgggtgatgctgcactctggatcgcgcggggtggggaacgccatcggcacc
cacttcatcgaactggccaagaaggacgcggagatgaaccagcgcaacctgcccgataaa
gacctcgcgtacttcgaggaaggcgcgcagtacttcggtgattacgtgaaggccgtgggg
tgggcgcagaagttcgccgccgccaaccgcgaggtgatgatgggccgcgtgattgccgcg
ctgcgaaaagtcatcaccaagccgttcgagacgcacattgaggcggtgaactgccaccac
aactacgtgcaacgcgaaacgcacttcgggcaagacgtgttcgtgacccgcaagggcgcg
gtgagtgccgagcaaggcaaactggggatcatcccggggagcatgggggccaagagcttc
atcgtgcgcggaaaaggcaaccccgagagcttcaacagctgcagccacggcgcagggcgc
accatgagccgcaccaaggcgaagaagctgttcaccgtggaagaccagatcaaggcaacc
gagggcgtggaatgccgaaaggatgcggatgtgatcgacgagattccgatggcttacaag
gacatcgacgcggtgatggcggcgcaggaggatctggtggaggtggtgtacacgctcaag
caggtggtttgtgtcaaggggtaa
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